Poecilia reticulata (guppy): 103479753
Help
Entry
103479753 CDS
T05149
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103479753 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103479753 (ndc1)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103479753 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
103479753
NCBI-ProteinID:
XP_008432604
UniProt:
A0A3P9P5J3
LinkDB
All DBs
Position
LG17:complement(23390895..23401370)
Genome browser
AA seq
669 aa
AA seq
DB search
MFPSETSCWFIRKVIWWRAAASIAWSVLLLPPTTAVFVFLSKFSFLHPIQTISECLSLLM
SSCLIFSFILLGGVVIMVGFLNLEYYTVIPTIACSKIALLGQLLHPRQXINSFAHCLMGV
IVGWCCAVTVGSRYETLGCPCKSSDGVPQMGLNEYHLVFLLAGAFVGFSHSLRGVIHNIN
YVSFNAVQQYKYLHFKGALPLVLKCSAIQAFYSIRNFTVAYFFLGYIPKTWICKTLNLHL
DSSVHRLDSITGFVDLSLLYHLWISATFLLFTWYTTLLLFRIFVTEVYSFPVQPTFTEDS
HQCLPRVLTDQQPMILKFLALQDLALLSKHSPSRRGEVFSLSQPGGHPYNWNAVSRECLA
LLADLTQRLVAYHETVATNGRAKSLSSGSERKTSSDTSCYSGTEDLMSTRPTFLTKTPAS
VFARSFAGGPHSPLTAPFTPDLDSPFSSPTLRRLTGPVDQCSPWHGSVQSPHIMRRAPKL
WSTSAESQVSSSPPRSPASVPSPKQEPAKPSFLAQFLQNRKEQVKNFLAKRVLIMYLFNK
LPEASSQALFADSQAHIWALEVLSYLVQASFTEDQFGVVQTTLPSILSSMLHLQEAVDRH
FKLPHASSKPVRSANSMEDFTYKTLRFALRATLKTAIYRITTTFGSHLNAVQMSAEHRKR
LQQFLEFKE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtttccttcggaaacaagctgctggtttatccgcaaggttatttggtggagagctgct
gccagcattgcctggtctgtcctgttgttgccgcccaccacggcagtttttgtgtttctc
agcaagttcagttttctgcaccccattcagactatttcagaatgcctgtctctgctgatg
agttcctgtttgattttctccttcatcctgcttggtggagtggtcatcatggttgggttc
ttgaatttagagtactatacagttatcccractattgcctgctctaaaatcgcactgctg
ggtcagctgcttcaccctcgccagrttatcaactcctttgcccactgcctgatgggagtg
attgtaggttggtgttgtgcggtcactgttggtagcagatatgagacactcggctgcccg
tgtaaaagtagcgatggtgttcctcagatggggctcaatgagtaccacctggtctttttg
ctggcaggagcatttgtcggcttctcccacagcctccggggagttatccataatataaat
tatgtctccttcaatgccgttcagcaatacaaatatctccacttcaaaggggctctgccc
ttagtgctgaagtgcagcgccattcaagcattttactctatcaggaacttcactgtcgct
tatttctttctgggttatatcccaaaaacatggatctgcaaaactctgaatcttcatttg
gacagctctgtccatcgtctggacagcataactggatttgtggacctgtccctcctctac
cacctctggatcagcgccaccttcctcctcttcacctggtacaccacattgctgctcttt
aggatctttgtcacagaggtgtacagttttcctgtgcaaccaacttttactgaagattcc
caccagtgtcttcccagagttctcaccgaccaacaaccaatgatcttgaagttcctagcc
ctgcaggacttggctctgctgtccaaacattctccatccagacgcggtgaagtcttcagt
ctcagccagccaggcggacatccttataactggaacgctgtcagtagagagtgtctggct
ctgctggccgatctgacgcagagacttgtggcttatcatgaaaccgtagcaaccaacggg
agggccaaatctctgtccagtggcagtgaaaggaagacttcatctgacacatcatgttac
tctggtacagaagacctgatgagtacaagaccaactttcctaaccaagactcccgcttcg
gttttcgcccgctcttttgccggaggtccacacagccctctgacggcaccgttcacgccc
gacctggacagccccttttcctctcccaccttgcggcggctcaccggtccggtggatcag
tgctcgccgtggcacggctcggtgcagagcccgcacatcatgaggcgggcgcccaaactc
tggtccacctccgcagagtcgcaggtcagcagcagcccaccacgctctccagcctcggtt
cccagtcccaaacaggaacccgccaaaccaagttttctggcccagttccttcaaaacaga
aaagaacaggttaaaaatttcttggcaaagcgggtgctgataatgtatttgtttaacaag
cttccagaagcctctagtcaggccctcttcgccgacagccaggctcacatctgggcgttg
gaagtgctgtcatacctggttcaggcctccttcacagaggaccagtttggggttgttcag
actacattacccagcattctcagctccatgctgcacttacaagaggctgtggatcgacac
tttaagctgcctcatgcttccagtaagccggtccgctccgccaacagcatggaggacttt
acctacaaaacactgcgctttgctctcagagccacactcaagactgccatttacaggata
accaccaccttcggaagtcatttaaacgctgtccagatgtctgcagagcaccgaaaaaga
ctgcagcagtttctggagttcaaagaataa
DBGET
integrated database retrieval system