Poecilia reticulata (guppy): 103479804
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Entry
103479804 CDS
T05149
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 7-like
KO
K13710
Rho guanine nucleotide exchange factor 7
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
103479804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103479804
Membrane trafficking [BR:
pret04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
103479804
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF67_u2
RhoGEF
RhoGEF67_u1
SH3_2
SH3_1
SH3_9
CH
PH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
103479804
NCBI-ProteinID:
XP_008432689
LinkDB
All DBs
Position
LG2:complement(18136587..18165158)
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AA seq
784 aa
AA seq
DB search
MNSAEQTVTWLITLGVLESPKKTISDPEAFLQSSLKDGVVLCKLLERLSPGSTEKIYPEP
KNDGECLSNIKEFLKGCTSFRVEPFEASDLLLGLNFSKVLISLVALNKVTADIGVGSDSV
CARHSSAHRIKSFESLSSQASLGRSSKLLQNQFRSLDMSENSGQQLLVKARFNFQQTNED
ELTFTKGDIISVTRQEEGGWWEGILNGKTGWFPSNYVREVKGSDKQVSPKSGTLKSPPKG
FDTSVISKTYYNLVLQNILETETEYSKDLQSLLTNYLRPLQNIDKLSSSDVALILGNLEE
ISTFQQMLVQSLEESTKSVLPLAALNTSSCFLAKTPQLPXVYSSLMLNCEFTVNPFCFSS
NLSETLRDFMEGHGAVSPGILTLTTGLSKPFMRLDKYPTLLKELERHMEENHADRPDILK
CMGSFKNLSAQCQEVRKRKELELQILTETIRLWEGDDIKTLGSVIYMSQVLVQSPMSEEK
NERYLMLFPHVLLMLSASPRMSGFIFQGKLPLTGMIVTKLEDCEAHKNAFELNGTLFDRL
QVVCANQQDLQDWVEHLTRQIKHSAATAPSHKPLAVPCHTLPSHPLTPSRHAESRAMTVA
PTYHTLPHPSSHGTTHSTMTWGPLEPPNTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSP
KSVKKLLPKRKPERKQSEEEFALRKSTAALEEDAQILKVXEAYCTSAKTRQTLNSTWQGT
DLMHNHVLADMDQSCVDSPGRRSSVSRPELSSDLSEDSDYDSIWTSHSYRMGSVPRKSCI
SHQN
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggcggaacagacggttacgtggttgatcacgctcggggtgctggagtcgccg
aagaagaccatctcggatcctgaagccttcctgcagagctccctaaaggatggggtggtt
ctctgtaagctgctggagcggctcagcccgggctccacggagaaaatttatccagaaccg
aagaacgatggcgagtgtctgagcaacataaaggagtttctcaagggctgcacatcgttc
cgcgtcgagccgttcgaggccagtgaccttctgctgggcctgaacttctccaaggtgctg
atcagtctggtggccctgaayaaagtcactgcagatatcggcgtggggagtgactcagtg
tgcgcccgacactcttccgcccaccgcatcaagtcgtttgagtcgctgtcttctcaggct
tcactgggccgatcctccaagctgctgcagaaccagtttcgaagtctggacatgtcagaa
aacagcggacagcagctgctggtgaaggctcgcttcaacttccagcagaccaatgaggat
gagctcaccttcaccaagggtgacatcatcagcgtgacccgtcaggaggagggcggctgg
tgggaggggatactcaacggcaagactgggtggtttcctagcaactatgtgcgtgaagtc
aaaggctctgataaacaagtgtcccccaagtctggcaccctgaagagtccaccgaaaggc
ttcgatacttctgtgatcagcaagacgtactataacctggtgttgcagaacatcttggag
acggagactgagtattctaaggaccttcaaagcctccttacaaactatctgcgacctctt
caaaacattgacaagctgagcagctccgacgtagctctgattctggggaacctggaggag
atcagcaccttccagcagatgctggtccagtcactggaggagtctacaaagtcagtcctc
cccctcgctgcgctgaacacgtcaagttgctttttagccaaaactcctcagttgccatag
gtttacagctctttgatgttgaattgtgagtttacagtaaatcccttctgtttctcctcc
aacttaagtgaaactcttcgggactttatggagggccacggtgcagtgtctcctgggatc
ctcaccctgaccactggcctcagtaaaccattcatgaggctcgacaaataccccacytta
ctcaaagagctggagaggcacatggaggagaatcatgcagaccgaccagatattctgaag
tgyatggggtctttcaagaacctttcagctcagtgccaggaggtgcgaaaacgaaaggag
ctggagctgcagattctcacggagaccatccggctgtgggagggagatgacatcaagacg
ttgggctcggtgatctacatgagccaggtgttggtccagagtcctatgtctgaggagaag
aatgagcgctacctcatgctgtttcctcacgtcctcctcatgctgtctgctagtcctagg
atgagcggtttcatatttcagggaaagctgcctttgactggcatgatcgtgaccaaacta
gaagactgtgaagcccataaaaatgccttcgagctaaacggcaccctgtttgaccgtctc
caggtagtgtgtgcaaaccagcaggacctgcaggactgggtggagcacctgacgagacag
atcaagcacagcgccgccacggcccccagccacaaaccgctcgctgtcccctgccacacg
ctcccatctcatcctctcaccccgtcccggcatgctgagagcagggccatgactgtggcg
cccacctaccacaccctgcctcacccgtcctctcatgggacgacccacagcacaatgaca
tggggccccctggagccaccaaacacccccaaaccmtggagcctgagctgcctgcgaccc
gcgccgccgttacgaccctccgctgcactctgctacaaagaggatctcagtaaaagtcct
aagagtgtgaaraaactccttcccaaacgcaaacctgagaggaaacagtctgaagaggaa
tttgctctaaggaagagtacagctgctctggaagaagacgcccagatcctgaaagttakt
gaggcgtactgcaccagcgccaaaaccaggcagactctgaactccacatggcagggcacg
gacctgatgcacaaccacgtgcttgccgacatggaccagtcctgcgtggactcgccgggc
cgccgcagcagcgtgtctcggccagaactgagctccgacctgtcggaggactctgactac
gactccatctggaccagccacagttacaggatgggatcagtgccccgaaagagctgcatc
tcccatcagaactag
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