Poecilia reticulata (guppy): 103479953
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Entry
103479953 CDS
T05149
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04510
Focal adhesion
pret04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103479953 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103479953 (lamc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
Laminin_B
EGF_LMN_ATRN
SlyX
Death
Motif
Other DBs
NCBI-GeneID:
103479953
NCBI-ProteinID:
XP_008432893
UniProt:
A0A3P9Q2U9
LinkDB
All DBs
Position
LG17:complement(28669697..28711560)
Genome browser
AA seq
1610 aa
AA seq
DB search
MGVLRPIERTERAGRMQNLIRALVACSWVAAVCVRGAMDECADEQGRPQRCMPEFVNAAF
NVTVEATNTCGSPPEEYCVQTGATGVTKSCHICDARDPRNHHNAAYLTDYNNQQDATWWQ
SQTMLAGIQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRSREGGPWVPYQYYS
GSCEKTYTKPSHGFIRTGGDEQEALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPV
LQDWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKDS
GGRLVCDCKHNTEGVDCGVCRAFYNDRPWRRATADSANACLPCDCNRKSSDCYFDAELYR
ATGHGGHCRNCADNTDGPNCERCLDNYHRDQSGNRCLPCNCNSIGSESPQCNSRGVCACK
PGVTGEKCDRCQPGFHSLTEAGCRPCTCSPSGSTQECDVNTGQCRCKDNVEGFSCDRCKP
GYFNLDPNNPQGCTACFCFQHSSVCDSAEGYSVHTISSTFDRGMEEWSGQTRDGSTVPVQ
WSPTGQEVSLMSEDYQPLYLVAPEKFLRNQMLSYGQNLSMTFRVERRDARLSAEDLILEG
ADMRLAVPLIAQGNAYPNENMQTFVFRLHEQPGYPWRPSISDSDFQKLLHNLTAIKIRGT
YSERSAGYLDNVSLVTARRGPGAPARWVEQCTCPPGYQGQHCEQCTLGYRRAQRELGPFS
SCEVCNCHGHSDACNPDTGACDCQDNTAGLSCERCRDGFYGDATQGTAGDCQPCPCPSGA
TCAVVPKTREVVCTNCPAGTTGKRCELCDDGFFGDPLGQNGPARACRSCQCSSNIDPNAV
GNCDRETGECLKCIYNTDGFFCDRCKAGFFGDPHASNPAEKCAACSCSPLGTVDQQTGCS
PVTGQCQCLPNVDGRDCSACQLGFFNLQSGSGCQECNCNPIGSTSGDCDIDSGQCECQPG
VAGQHCGRCEVNFFGFSSSGCKPCDCDPEGSLSGQCKEDGRCECRPGFVGARCDMCEENY
FYNRSVPGCQQCPSCYSLVRDKVNQQRQKLQELQTLIDNLGSGQDTVSDEAFEDRLKEAE
KVIMELLEEAQNSKDADRGLLDRLSALNITLTTQWNRLQSIRNTVDDTSAQADRARDRVQ
DAERLIDRARQELAKAKEAVSKVDVKPTDGSGEPNNMTLLAEEARRLADKHKMDADQIEK
IAKDANDTSTKAYNLLLKTIDGESKMADEIDKLNRMYNEAKDRAKDLEQQANKVQAEADD
AGNKALKLFANLTSLPPFDTKTLEDDAKKIKKEASDLDNLIDKTEREYNELRDDLKPKEQ
EVRKLLDKGKSEQQTADQLLARADAAKALAEEAAKKGQSTFREAESILEDLRDFDRRVND
NKTAAEEAMKKIPVINATIMAANEKTRQAKEALGNAASDAGEAKRKAEEAERIAGNVQKG
SARTKEEAEKALQDTNKLDKDVDDMMDQLSAAEEELKKKKAEADSDMMMASMASDSAKQA
EDNARKAKSTVKTVLKIITDLMDQLGNIDKVDLSKLNQIAESLKRAKDKMAGSELDKKLR
ELNDVATTQKEMIDDYDRQIREIRSDINNLNDIKAALPEGCFNTPSLEQP
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgggagttttgcggccgatcgagaggacggagcgggcgggcaggatgcagaacctgatc
cgggctctggtggcgtgcagctgggtggccgcggtgtgcgtccgcggcgccatggatgag
tgcgcggacgagcagggccgaccgcagcgctgcatgccggagttcgtgaacgcggccttc
aacgtgacggtggaggccaccaacacctgcggctccccgccggaggagtactgcgtccag
accggcgccaccggggtcaccaagtcctgccacatctgcgacgcgcgggatccccggaac
caccacaacgccgcgtacctgaccgactacaacaaccagcaggacgccacctggtggcag
agccagaccatgctggcggggatccagtaccccaactccatcaacctcaccctgcacctc
gggaaggccttcgacatcacctacgttcggctgaagttccacaccagccgtccggagagc
ttcgccatctacaagcggagcagagagggcggcccctgggtgccgtaccagtactacagc
ggctcctgcgagaagacctacacgaagccgagccacggcttcatccggaccggcggcgac
gagcaggaggcgctctgcaccgacgacttcagcgacatctcgccgctgaccggaggaaac
gtggccttctccacgctggagggccgaccgagcgcctacaacttcgacaacagcccagtc
ctccaggactgggtgacggccacagacatcagagtgaccctgaacaggctcaacacgttc
ggagacgaagttttcaacgaccccaaggtcctcaagtcctactactacgccatctctgac
ttcgccgtgggaggaaggtgtaagtgtaacggccacgccagcgagtgtgtgaaggacagc
ggcggccggctggtctgcgactgcaaacacaacacggagggcgtggactgcggcgtgtgc
agagctttctacaacgaccggccgtggaggagggcgacggccgacagcgccaacgcgtgt
ctgccctgcgactgcaacaggaagagctcagactgttacttcgacgccgagctgtaccgg
gccacgggtcacggaggtcactgcaggaactgcgccgacaacaccgacgggcccaactgt
gagcgctgcctcgacaactaccacagagaccagagcggcaaccgctgcctgccctgcaac
tgcaactccatcggttctgagtctcctcagtgcaacagcagaggcgtgtgcgcctgcaaa
cccggagtcaccggggagaagtgcgaccgctgccagccggggttccacagcctgaccgag
gccggctgcaggccttgcacctgctcgccgtcaggcagcacccaggagtgtgacgtcaac
acgggtcagtgccgctgtaaagacaacgtggagggcttcagctgcgacagatgtaaacca
ggttacttcaacttggaccccaacaacccccagggctgcacggcctgtttctgcttccag
cactcgtctgtgtgcgacagcgccgaaggctacagcgtccacaccatcagctccaccttc
gacagaggtatggaggagtggagcggccagacgcgggacggatccaccgtccctgtccag
tggtcccccaccggacaggaagtgtccttgatgtctgaagactaccagccgctgtacctg
gtggccccagagaagttcctgaggaatcagatgctgagttacggacagaacctgagcatg
accttccgagtggagcggcgggacgctcggctgtcggccgaggatctgatcctggagggg
gccgacatgaggctggccgtcccgctcatcgcccagggcaacgcctaccccaacgagaac
atgcagacctttgtgttcaggctccacgaacagcccggctacccctggaggccgagcatc
agtgactcagacttccagaaacttctccacaacctgacggccatcaagatccggggcacc
tacagcgagcggagtgctggttacctggacaacgtctccctggtgacggcgaggcggggc
ccaggagcgccggcccgctgggtggagcagtgcacctgtccgccgggttaccagggtcag
cactgtgagcagtgcaccctgggataccgccgggcccagcgggagctcggacccttcagc
tcctgtgaagtctgcaactgccatggacacagcgacgcctgcaaccctgatactggagcc
tgtgactgccaggacaacactgccgggttgagctgcgagcgctgccgcgacggtttctat
ggcgacgccacccagggcacggcgggcgactgccagccgtgcccctgccccagcggtgcc
acctgcgctgtcgtccccaaaaccagagaagtggtttgcaccaactgtcctgctggaacc
acagggaagcgctgtgagctctgcgacgacgggttctttggggaccctctgggtcagaac
gggccggcccgagcctgccggtcctgccagtgcagcagtaacatcgaccccaacgccgtc
ggaaactgcgaccgcgagacgggagaatgtctcaagtgcatctacaacaccgacggcttc
ttctgcgaccgctgcaaggcgggcttcttcggagacccgcacgcctccaaccctgctgag
aagtgtgcagcctgctcctgctctccgctgggcaccgtggatcagcagaccggctgctct
ccggtcaccggtcagtgtcagtgtctgcctaacgtggatggacgcgactgcagcgcctgc
cagctgggattcttcaacctgcagagcggcagtggctgccaggagtgtaactgcaaccca
atcggctccaccagtggcgactgtgacatcgactcaggacaatgcgagtgccagcccggc
gtcgccggccagcactgtggccgctgtgaggtcaactttttcggcttcagctcgtctgga
tgcaaaccgtgtgactgcgaccctgaaggttctctgtccggtcagtgtaaggaggacggc
cggtgcgagtgtcgacccggcttcgttggagctcgatgtgacatgtgtgaggagaattac
ttctacaaccggtcagtgccgggctgccagcagtgtccgtcctgctacagtctggtccga
gacaaggtgaaccagcagaggcagaagctccaggaactccagactctgatagataacctc
ggctccggccaggacacggtcagtgatgaggcctttgaggacagattgaaggaggcagaa
aaggtcatcatggagctgctggaggaggctcagaatagcaaagatgcagaccgaggtctg
ctggaccgtctgagcgccctgaacatcaccctgaccacccagtggaaccgactgcagagc
atccgcaacacggtggacgacaccagcgctcaggctgaccgcgcgcgggacagagtccaa
gacgccgagagactgatagaccgagctcggcaggagctggccaaggccaaggaggccgtc
agcaaagtggacgtcaaaccgactgacggctctggagaacccaacaacatgacgctgctg
gcggaggaggcccggcgcctcgccgacaagcacaagatggacgccgaccagatcgaaaag
atcgccaaagatgccaacgacacgtcaaccaaagcgtacaacctgctgctgaagaccatc
gacggcgagagcaagatggctgacgagattgacaagctcaaccggatgtacaacgaggcg
aaggaccgggccaaggacctggagcaacaggccaacaaggtgcaggcggaggccgacgac
gccgggaacaaagccctgaagctgtttgccaacctgaccagcctgccgccgtttgacacc
aagacactggaggatgacgccaagaagattaagaaggaggcgtctgatctggacaacctg
atagacaagacggaacgggagtacaacgagctgcgagacgacctgaagcccaaagagcag
gaggtccggaagctgctggacaaagggaagagtgagcagcagactgcagatcagctgttg
gcccgagccgatgccgctaaagctctggccgaggaggcggcgaagaaaggccagtcaact
ttcagagaagcagagagcatcctggaggacctccgagactttgacaggagggtcaacgac
aacaagacagcagcagaggaagccatgaagaagatccctgtcatcaatgccaccataatg
gccgccaacgagaagacccggcaggcgaaggaggcgcttggtaatgctgccagtgatgct
ggggaagccaagaggaaggccgaagaggctgagaggatcgcaggcaacgttcagaagggc
tcggctaggactaaagaggaggcagagaaggcgctgcaggacacaaacaagctggacaaa
gatgttgatgacatgatggatcagctgagcgccgcggaggaggagctgaagaagaagaag
gctgaggctgacagcgacatgatgatggcttccatggcatcggatagcgccaaacaggct
gaggacaacgctcgcaaggccaagagtacggtgaagacggtcctgaagatcatcacagat
ctaatggatcagctgggaaacattgataaagtggatcttagcaaactgaaccagattgct
gagtctctgaagcgtgccaaggacaagatggccggcagcgagctggacaagaagctgagg
gagctgaatgacgtggcgaccacacagaaggagatgatcgacgactatgaccggcagatc
cgagagatccgcagcgacatcaacaacctgaacgacatcaaggcggcgttacccgaaggc
tgcttcaacacgccgtcgctggagcagccttag
DBGET
integrated database retrieval system
