Poecilia reticulata (guppy): 103479959
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Entry
103479959 CDS
T05149
Symbol
smg7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103479959 (smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103479959 (smg7)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
103479959 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
103479959 (smg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
103479959
NCBI-ProteinID:
XP_008432901
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All DBs
Position
LG17:complement(28575305..28590073)
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AA seq
1166 aa
AA seq
DB search
MNLCAQYLRQAEALKADMTDSKLGAAEVWTSRQALQDVYQKMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRV
RSSQLGIISNRQGGGGAIVTPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQL
VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDDVK
TKWSVSDFIKAFIRFHGHVYLSKSLDKLDALRQKLEEQFQRLILQKAFSSQQLVHITVIN
LFELHHLTADGGEPSGAEHRVSWFQLLGLFMSFLGVMCGRILLNKTRGEDIMGECPLPAI
KLSLDWLKLRTSVFQEAAVENRKYVWPWLVSILNSFQPREEDLSSSSALPLPEEFELQGF
LALRPALRCLDFTKGHQGILVDRDGLPVHARHQRLVALGKWVADSQPGLIRCQVNEDGLL
LFLTDIPEEAVEEPQEKEAPVLQEASNGEQTQNDAANSGLKSVLSAGKTQSSWSDGNERP
VVTFKENIKPREPGREPGRNQPLKELSKERRDFPKAGGSAAAKMEPKRDGKRKSEVKKAA
HEKAADAGKQVKAQTELRKTPVSEVKKTPVTQSQTAGSSQFIPIHHPGAFPPLPSRPSFP
PSAYVIPPPVAFPGIQVNPGFTFPAGVSVPASFLQSAVHQQAGGPAGKPSHIPYSQQRPS
GPGASGQGPPAPQQQPSVQLQVQALGQQQQQSPTKPGQQGGMGKSPPHHPGLQQFMQVQD
QPAMWSAPPAALQKLSPLQMSMKQQQFFMGAPDSLKLYEQQLPGPQTHVSNMDKKMKFPD
VKMQDFYWEPSYRMDRMGEGLALMAERMKRAPPAGMCVEPEGPAGPRGPAYEDKNSPFLP
PDLLKTLADLEEDEELIFAKPPDFFQALAGPLSSAPGPNIFLPSQSRMDSSQEAVSQPSS
LLPVAGFPMQDFTQNSIFSQAYGKNLPPGSKADAPMMQQEPSLYSLFEGNPWSPSLPASS
DHSTPASQSPHSSNPSSLPSSPPTHNHGAASFSNFGPIGTPDSRDRRVVDRWKAEKPGTG
FGLDYLPAAASAAPPDSSWHQAGSAGSSWTNQESPMEESSSTVLLDSLKSIWSSSMMQPG
PSALEQLLLQQKQKLQRGHGAMNPPH
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctgcgcccagtacctgcgccaggctgaggccctgaaggctgacatgacagac
tccaagctgggggcagcagaggtgtggacgtcccgccaggcgctgcaggacgtctatcag
aagatgctggtgacggacctggagtacgctctggacaagaaggtggagcaggacctgtgg
aaccacgccttcaagaaccagatcaccactctgcaaagccaggccaagaaccgggccaac
ccgaaccgcagcgaggtccaggccaacctgtcgctgttcctggaggccgccagcggcttc
tacacccagctgctgcaggagctctgcaccgtcttcaacgtggacctgccgtgccgggtc
cgatcctctcagctcggcatcatcagcaaccggcagggcggcggcggcgccatcgtcacg
ccgcagcccagctcctgctcctacatctgccagcactgcctggtccacctgggagacatc
gctcgataccggaaccagaccagccaggcggagtcgtactaccgacacgcggcccagctg
gttccgtccaacggtcagccctacaaccagctggccatcctggcctcctccaaaggcgat
cacctcaccaccatcttctactactgccgcagcatcgctgtcaagttccccttccccgcc
gcctccaccaacctgcagaaggccctgtccaaggccctggagagccgcgatgacgtgaaa
accaagtggagcgtttctgatttcatcaaagccttcatccggttccacggacacgtctac
ctgagcaagagcctggacaagctggacgctctgaggcagaaactggaggagcagttccag
aggctgatcctgcagaaagccttcagctcccagcagctggtccacatcaccgtcatcaac
ctgtttgagcttcatcacctgacggccgacggcggcgagccgagcggcgccgagcatcgg
gtcagctggttccagctgctcggactcttcatgtccttcctgggcgtgatgtgcggccgg
attctgctcaataagacgcggggcgaggacatcatgggggagtgtcctctgccggccatc
aagctgtctctggattggctgaagctgaggaccagcgtcttccaggaagctgccgtggag
aacaggaagtacgtctggccgtggctggtgtccatcctcaacagcttccagcccagggag
gaagacctgtcctcttcctcagcgctgccgctgccggaggagtttgagctgcagggcttc
ctggcgctgcgtccggctctgcgctgcctggacttcaccaaaggtcaccagggcatcctg
gtggaccgggacggcctgccggtccacgcccgccaccagcggctcgtcgctctggggaag
tgggtcgccgacagccagccggggctgatccggtgccaggtgaacgaggacggcctgctc
ctcttcctcaccgacatcccggaggaggccgtcgaggagccgcaggagaaggaggcgccg
gtgctgcaggaggcgtccaacggcgagcagacgcagaacgacgccgccaactcgggcctg
aagtcggtgctgtccgccgggaagacccagagctcctggtccgacggcaacgagcggccc
gtcgtcaccttcaaggagaacatcaagcccagggagccgggccgggagccgggccggaac
cagccgctgaaggagctcagcaaggagcgccgcgacttccccaaggccggcggctcggcc
gccgccaagatggagcccaagagggacgggaagaggaagagcgaggtgaagaaggccgcg
cacgagaaggcagccgacgccgggaagcaggtgaaggctcagacggagctgaggaagact
ccggtgtcagaggtgaagaagactccggtcacgcagagccagacggccgggtcgtcccag
ttcatccccatccatcaccccggagctttcccaccgctgcccagcagacccagtttcccg
ccctcggcctacgtgatcccgcccccggtggcgttcccaggaatccaggtgaatccgggc
ttcaccttccctgccggcgtgtccgtccccgcgtccttcctgcagtcggccgtccaccag
caggcgggcggcccggccgggaagccgtcccacattccctacagccagcagaggccgtcg
gggccgggggcctcgggccaggggcccccggccccccagcagcagccgtcggtgcagctg
caggtccaggccctcggccagcagcagcagcagtcccccaccaagccggggcagcagggc
gggatgggcaagagcccgccgcaccacccagggctgcagcagttcatgcaggtccaggac
cagccggccatgtggagcgcgcccccggcggcgctgcagaagctctccccgctgcagatg
tccatgaagcagcagcagttcttcatgggggccccggactccctgaagctgtacgagcag
cagctgccgggcccccagactcacgtctccaacatggacaagaagatgaagttccccgac
gtgaagatgcaggacttctactgggagccgtcgtaccgcatggaccggatgggggagggg
ctggccctgatggcggagcgcatgaagagggccccgcctgctgggatgtgtgtggagccg
gagggccccgcggggccccggggtccagcatacgaggacaagaactcgcccttcctccct
cctgacctgttaaaaactctagcagacctggaggaggacgaggagctgatctttgctaag
cctcctgatttcttccaggccctggccggccctcttagctcggctcccggaccaaatatc
tttctgcccagccagagcaggatggacagcagccaggaggccgtcagccagccgtcctct
ctgctgcccgtcgccggcttccccatgcaggatttcacccagaacagcatcttcagtcag
gcgtacggtaagaacctgccgcccggctccaaagccgacgctcccatgatgcaacaggag
ccgtccctgtactccctgttcgagggaaacccctggtcgccctccctgcccgccagctca
gaccactccaccccggccagccaatcccctcactcctccaaccccagcagcctgccctcc
tccccccccacccacaaccacggagccgcttccttctccaacttcgggcccatcggcacc
ccggacagccgggaccggcgggtcgtggaccgatggaaggccgagaaaccggggaccggc
ttcggcctggactacctcccagccgccgcctccgccgcgccgcccgactccagctggcac
caggccggctcggcggggagctcctggaccaatcaggagtctcccatggaggagtcgtcc
tccaccgtgctgctggacagcctgaagtccatctggtccagctccatgatgcagcccggc
ccgtcggcgctggagcagctcctcctgcagcagaagcagaagctgcagcgaggccacggc
gccatgaacccgccgcactga
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