Poecilia reticulata (guppy): 103480127
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Entry
103480127 CDS
T05149
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103480127
Transcription factors [BR:
pret03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103480127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
103480127
NCBI-ProteinID:
XP_008433185
LinkDB
All DBs
Position
LG18:complement(3812954..3818184)
Genome browser
AA seq
303 aa
AA seq
DB search
MYSLMEHELKPNGQPQTHQTGMSPVTGNLTGSMGTNGNSLPKTACPPGGDPMDKVKRPMN
AFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKEYP
DYKYKPRRKTKPLLKKDAQVGKYPLSAGNLLTAAAQNQGGSPRMEGYGWAPTGGYTGMQN
EALSYTQQLHRYDLSALQYPPAMTAAQTYMSGANSYSPMSYSSSPQQLSPVNMPMVKAEP
VAHSPSTGTPNHHRGALQGDLRDMISMYIPGPGGDSSDPATAQRGYTSVQQHYLSGTVPL
THI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcttgatggaacacgagctgaaaccaaacggtcagcctcagactcatcagacc
gggatgtcaccggtcaccggcaacctcaccgggagtatggggaccaatgggaactctctc
ccgaaaacggcgtgtccacctggaggcgaccccatggataaagtcaagaggcccatgaac
gcttttatggtgtggtcaagaggacagaggcggaagatggctcaggagaaccccaagatg
cacaactccgagatcagtaagcgactgggagccgaatggaaacttctgaccgatgctgag
aagcggccgttcatcgacgaggccaagagactccgggccgtccacatgaaggagtacccc
gactacaaatacaaaccccgccgcaaaaccaagccgctgctgaagaaggacgctcaggtg
ggcaagtatccactgtcggcagggaacctactgacggcagcggcgcagaaccaaggcggc
agtccccggatggagggctacggatgggctcccaccgggggctacaccggtatgcagaac
gaggcgctcagctacacgcagcagctgcaccggtacgacctgtccgctctccagtacccg
cccgcgatgacggcggcgcagacgtacatgagcggagccaactcctacagtcccatgtca
tacagcagcagtcctcagcagctgagcccggtgaacatgcccatggtgaaggcggaaccg
gtggcccattcgccttcaacaggaacgccgaaccaccacagaggggctttgcagggggat
ctcagggacatgatcagcatgtacattcccggacctggaggggattcctccgatcccgca
actgcacagaggggctataccagtgtccagcagcactacctcagtggaacagtgccactt
acgcacatttag
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integrated database retrieval system
