Poecilia reticulata (guppy): 103480505
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Entry
103480505 CDS
T05149
Symbol
pcdh7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103480505 (pcdh7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pret01009
]
103480505 (pcdh7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pret04515
]
103480505 (pcdh7)
Protein phosphatases and associated proteins [BR:
pret01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103480505 (pcdh7)
Cell adhesion molecules [BR:
pret04515
]
Cadherins
Protocadherins
103480505 (pcdh7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
Motif
Other DBs
NCBI-GeneID:
103480505
NCBI-ProteinID:
XP_008433694
LinkDB
All DBs
Position
LG18:9229209..9358329
Genome browser
AA seq
1262 aa
AA seq
DB search
MGTTAAVDCLYYCMLILQLVHQPAASKQVLRYRLAEEGPADVRVGNVAGDLGIVAGSGEV
TFTLESGSEFFKIDNITGELTTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWV
DLFEGKVTILDINDNTPSFPSPVLTLSVEENRPIGTLYLLTTATDRDFGRNGIERYELIQ
DNGENSRRLGSSGDSYSGKRRFEEGASRSSVFELQVADTIDGEKQPQLIIKGALDREQRD
SYELSLRVRDGGDPPRSSQAILRVMITDVNDNNPRFEKNVYEADLPENSSPGAPILQLKA
ADADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQ
PPKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVMVDAPIALVQVSDRDQ
GENGVVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSAPLDYEATQEYNVVIVAVDSGS
PSLASNNSLIVKVGDTNDNPPIFSQNVVEVSFPESNAPGERVTTVKAVDADSGKNAEIAY
SLDSSVNGIFSIDADSGDIRVNTILDREQTERYEFKVIAKDKGINTLQGSATVVVLVGDK
NDNDPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEMGLFIEEEEEIFSIENETG
TIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTL
LPPSSNIRTVVRTVIATDTDTGINADLNYSIIGGNPFKLFEIDGGTGVISLMAKLEPKHY
GLHRLVVQVNDSGQPSQSTTTLVHVYVNETLSNSTIVEAQVAKSLSTSLNTNIAGDPNYD
LSKQRLSIVIGVVSGIMTVILIILVVVMARYCHPKNKNGYEAGKKDHEDFFTPQQHDKSK
KPKKDKKKQKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDL
ARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSDYSTQTI
NKYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLDESETPSSKSSSGPRLGALPLPED
SYERTTPDGSVGEAEHMENDSRPLPDVAMTGKCTRECNEYGHSDSCWMPVRTSPERRPSK
STTNPQQQPKLSTFMTGNGSSGSSSSSGSAEQPGSQETLAMAAMANGDPTTTHMMGDRNR
NLLNKKMASSSSSYEAFGSPSYGSPGGGEETLGHPTEEIPLAPTGEYKPTSCGTLTRREV
YL
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggggactactgcagcagtggactgtttgtactattgcatgctcatattgcagctcgtg
catcagcccgctgcgagtaagcaagtgctccggtaccgcttggcggaggagggacctgcc
gatgtcagagttggcaacgtagcaggcgacctgggcattgtggccgggtccggcgaggtg
acgttcaccctggagtccggctcggagtttttcaaaatagacaacataacaggtgagctc
accaccaacgagaggcggatagaccgcgagaaattacagcagtgccaaatgatatttgac
gagaacgagtgtttcatagatttcgaggtgtccgtgattggaccggctcagagctgggtc
gacctctttgaggggaaagtcaccatattagatataaatgacaacactccgtctttcccc
tcgcctgtcctgacactgtctgtggaggagaacagacccattggaaccctttatctgctg
accacagccacagacagagattttggcaggaacggaatagagcgatatgagctaattcag
gacaatggggaaaactcgaggcgtttgggatcttctggggattcctactctggaaaaaga
agatttgaggagggcgcgagcaggagcagtgtgtttgaactgcaagttgctgacactatt
gatggagagaagcaaccccaactcatcattaaaggggcccttgacagagaacagagagac
tcttatgagctctccttgcgggttagggacggaggagatcccccacgttcctctcaggcc
atcctgagagtaatgatcactgatgtaaatgacaacaacccgcggttcgagaagaacgtg
tatgaagctgacctgccggaaaacagctcccctggtgcgccgatactccagcttaaagca
gctgatgcagacgttggggttaatggtcaaattgaatatgtgtttggggcggccacagag
tctgtgagaaggctgctgaggttggatgagagcactggctggctaagtgtgttgcaccgc
attgaccgtgaagaagttagccaactgaggttcacagtaatggctcgtgaccgaggccag
ccgcccaaaatggataaggcaacagtggtgctgaatatcaaggacgagaacgacaacgtc
ccagcgattgaaatccgaaaaattgggcgcattttcctaaaagacggagtggcgaacgta
gctgaggacgtgatggtggacgcacccattgctttggttcaggtgtcagacagagaccaa
ggagagaatggcgtagtaacctgcacagtcgtgggagatgttccctttcaactcaaacca
gccagtgagatggaaggtgaacagaataaaaaaaagtattttctccacacgtctgcacca
ctggactatgaggccacacaggaatacaatgtggtaatagtggctgtggactctggaagc
cctagtctggcaagtaataactctcttatcgtcaaagtgggtgacactaacgacaatcct
cccatcttcagccagaatgtagttgaggtatccttccctgaaagcaatgcccctggcgag
agggtgacaacagtaaaagctgttgatgctgacagtgggaaaaatgctgaaatagcatat
tccctcgattcatctgtaaatgggattttctctattgatgcagacagtggagacatccga
gtaaacaccatcttggatagagagcaaacagagcgctatgaatttaaagtgatagctaaa
gataagggcataaacacgcttcagggttctgctactgtggttgtccttgtgggggataaa
aatgacaacgatccaaagttcatgcaggatgtgttcaccttctatgtcaaagagaatctt
gaccccaacagccctgttggtatggtcacagtaatcgatgctgataaaggccaaaatgca
gagatgggccttttcattgaggaggaggaggagatcttttccattgagaatgaaactggg
actattttttccaccctctcctttgaccgggagcaaaaaactacatacacattccgtgtc
aaagctgtggatggtggtgatccacccagatccgccacagccacagtctcactcttcgtc
atggatgaaaacgacaatgcaccaacagtcaccttcccaataaacagctcctacaccctc
ctacccccctccagtaacatcaggacagttgtcagaactgtcatagccacagatacggac
actggcatcaacgcagacctgaactacagcatcattgggggcaaccccttcaagctgttt
gagattgatgggggcacaggggtgatctcattgatggcaaagctggaaccaaaacactat
ggtctccacagacttgtggtccaagtgaatgacagtggtcagccttcacagagcaccacc
accctggttcacgtgtatgttaatgagacactttccaattccacaattgtggaggcacag
gtggctaagagcctgagtacctccctgaacaccaatattgctggtgaccccaactatgac
ctcagcaaacaacgattaagcattgtaattggagtagtttcgggcatcatgactgtcatt
ctcatcattctcgttgttgtcatggcccgttattgccacccaaagaacaagaatggctac
gaggcaggaaagaaagatcacgaggacttttttacaccacagcagcacgacaaatccaag
aagcccaagaaagacaaaaagaaacaaaagtccaaacagcctctctatagtagtattgtc
acagtagaggcctccaaacctaatgggcaacgctacgacggcgtcaatgagaagctgtca
gacagccccggcatgggacgctaccgttcagtcaacggtgggccgggaagtccagacctg
gctcggcactacaagtccagttcaccgctcccaactgtccagcttcaccctcagtcaccg
acagctggaaaaaagcaccaggcagttcaggacctgccccctgccaacacctttgttggc
accggagataacatttcccttggatctgaccactgctctgactacagcactcaaaccatc
aacaagtacaacaaacagccgtttcgtcgagtgaccttctcggtggtgagccagccccag
gaccctcaccagcagggatcgctgcagagctgctacgacagtggcctggatgaatccgag
acacccagcagcaagagctcttcgggcccccggctgggcgccctccccctgcccgaggac
agctacgagaggacaacgccggatggcagtgtcggtgaggcagagcacatggaaaatgac
tcccggcccttgcctgacgtagccatgactggcaagtgcacccgggagtgcaacgagtac
ggccactcggactcctgctggatgcctgtgcgcacgtcgcccgagcgacggccgtccaag
tcaaccaccaacccccaacaacaaccaaagctttccactttcatgaccggcaatggcagc
agcgggagcagtagcagcagcggcagcgcggagcagccgggtagccaagagaccctcgcc
atggccgccatggccaacggagaccccaccaccacgcacatgatgggagaccgcaaccgc
aacttgctcaacaagaagatggcctcctcctcttcttcttacgaggcctttggctcgcct
tcctatggctcgccaggaggtggcgaggagacgctgggccaccctaccgaggagatcccc
ctcgcgccaaccggagagtacaagcccacgtcgtgtggcacgctgacgcgacgggaggtg
tacctgtaa
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integrated database retrieval system
