Poecilia reticulata (guppy): 103480683 Help Entry 103480683         CDS       T05149                                  Name (RefSeq) synaptopodin-2-like isoform X1   KO K24066   synaptopodin-2 Organism pret  Poecilia reticulata (guppy) Pathway pret04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pret00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     103480683  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:pret04990]     103480683 Domain-containing proteins not elsewhere classified [BR:pret04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    103480683 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 Calsarcin PDZ_2 Motif Other DBs NCBI-GeneID:  103480683 NCBI-ProteinID:  XP_008434016 LinkDB All DBs Position LG18:complement(15973414..15997075) Genome browser AA seq 1566 aa AA seqDB search MGTGDYICVTLRGGAPWGFSLRQGEGDIYRPLLASQVEDGSRAYLAGVQEDDEVVSINGE PCSDLTLLQALALIETSTSTLQLLLKRCNFLPSEDSDSEGTSLGEKVSSDENLKSTTLHI ISPKSEIPREVHISDPQGKVLHRELDSDTEALPRVKLSDDLGGHELAFKHNKEVRRCCSP GEFVELQVSLSDQTLAYGVCTSLGSARGIEGDFSAIDPVHTTSSHHAQCPVREPLSQHGV VVRAPTVEGTLQPPDASGTGRSTLSVGGPTITENTGSQSEEEEGGGPSQPVPASFTVSFE IPSDEATLAEEQEDSESEGDQEKPNKHRAKHARLRRNESLSEKQVKEAKSKCKRIALLLS AAPSNPNNKGVLMFKKHRQRAKKYTLVSYGTGEDEPDFSDEEDDVNGDDKQEIPAGEFSF EAAIDCESNRPFLLNAPGSKGVLTFKLGKSLVEINNNLNNQAEMECLPETKGKGATMFAQ RRQRMDEITAEHEELRRQGLPVEAVQELEKKVTEQSYIQSATEGHGYLDVNMHQQNQQQY QQYQEQQYYEQQQNYQQQQQYQQYQQQQYEQQYKQQLYQQQQQYHQEHQQMQQYSTNING AIQHQTNEIQSSYNNRTAKPFITENLVATPYSHGASGTNQDPVGQGEQIASRDERISTPA IRTGLLSDSRRKNTGKPMFTFKETPKVSPNPALLNLLNRSDKKGFESGPEEDYLSLGAEA CNFLQSQRLKPKIPPPVAPKPLINPNSPPWSAQIEAANQDVPQCAENSLSTPAAAPTTET APAPELEPTPAPAPEPSTLPTPEETTANPTPAEQHSWTLPEPESQQQPAQVTSQETHGQV ISVQHCESSQMATWGPVQVQAHQQSAACSWQSAQVQPQNPPPSQSPPQPPWVTRQSTQSQ AQIQLSSNTWTPQGQPSWTPHEEQAQPQTNAQPSWAQPQEQLQSHPQVQPPWTLMKEKQH LQQTQASWSQAQEPVQTQPQNQWMQAPHTDSQQQLPWVQQKPQVQPPWVQQVQPEIQPQP PWVQQVQPETQPSWGQQQQHQALPQAWANAQVPGQPQPPWVSTPPQPQPPASPWAQSQTQ AQTQPPWMNAAQVQPQAQAQVNLNPWAPVPAHTPAQTSWAPQPPEHGGEQPINSWAQDQS HAQHQPPWVQSVPSPPTPQSNWQQSLSNTSQQPQLNTWPSAQAQPPTPVNDWRPQLQQSS LNVPLSTVNTQPSPKPWHPPQNQTPPPPPRRMFSYTVGQKAASPVNPMATVLNPKLSPGP AFEMPVVKGKGADMFAKRQSRMEKFVVDSETVEANKASRSTSPAASLPNEWKYTPNVRAP PPRAYNPIQSPFYPLAATKQPPASSPSIKAKKKDQEKRAPAPKPLNVIDVMKHQPYKLDS SLFIFGAGAEAAKPPVPKPSSPPHPLLDSQTIRYEQMAPSEQAGPFTPPYPQQGYGIPMQ PVMHDPHYQQAQGNVYPYQPSPGSPYQQEYNQQYLQAVPPTYHPQAPQPLNHPYQQAAYQ PASSPPYLATPSVPYKPPPTNNYIAPSFPVAARPESVTGGGTAPKPKFTANKSSAQVWKP TVVEKE NT seq 4701 nt NT seq  +upstreamnt  +downstreamnt atgggcaccggggactacatctgcgtgaccctgcgtggtggcgcaccgtgggggttcagc ctaagacagggagagggggatatttacagacctttactcgcttcccaggtggaagatggt agtcgcgcctacctggccggagtccaggaggatgacgaggtggtgtcgatcaacggagaa ccctgctctgatctcacgcttttacaagctttagcactcatcgaaacgtctaccagcacc ctgcagttacttctgaaaagatgcaatttcctcccctctgaagacagcgactcagaaggg acgtcccttggtgaaaaggtctcttcagatgagaatttaaaaagcaccaccctccacatc atttccccaaaatctgaaatcccaagggaggtccacatatctgatccccaaggtaaggtg ctccatcgggagctggacagcgacacagaagctctccccagagttaaattgtcagatgac ttgggaggccatgagctggcttttaagcacaacaaggaagtgcgacgatgctgttcccca ggagagtttgtggagcttcaggtgtccctgtctgatcaaaccttggcgtatggggtctgc acctctctcgggagtgctcgagggattgaaggggacttttcagcaatcgaccccgttcac accacctcatcccaccatgcgcaatgccccgttagagaaccgctcagtcagcatggcgtg gtggtccgcgctcccaccgtggagggcactttgcagccgccagatgcatcaggaacaggg aggagcactcttagcgtgggtggccccacgatcaccgaaaacactgggtcgcaaagtgaa gaggaggaaggagggggacccagtcagcctgttcctgcgtctttcactgtctcattcgaa attccatcggacgaggcaactctagcagaagagcaagaagactccgaatcagaaggggat caagaaaaacccaacaagcatcgggcaaaacacgcaaggctcagacgtaacgaaagtctg tcagagaaacaggtgaaggaggccaaatccaaatgtaaacgtatagctctccttttgtcg gccgctccttcaaaccccaacaataagggggtgttgatgttcaagaaacatcgtcagagg gccaagaaatacacgcttgtaagctacggcacgggagaggacgaaccagacttcagtgac gaagaagacgacgtgaacggagacgataagcaagaaatcccagctggtgaatttagcttt gaagctgctatcgattgtgaatcaaacaggccttttcttttgaatgctccaggtagtaaa ggtgtgctaacttttaagttagggaagagtcttgttgaaattaacaacaacttgaacaac caagctgagatggaatgtttgcctgaaaccaaaggcaagggtgcaacgatgtttgctcaa aggcgtcaaaggatggatgagatcacggctgaacatgaggaactccggcgtcaaggacta cccgtggaagcagtgcaagagttggagaagaaggtaacggagcagtcctatattcagtcc gcaacagagggtcatggttacttggatgtgaatatgcaccaacaaaaccaacagcagtac cagcagtatcaggagcaacagtattatgagcaacaacaaaactaccaacagcagcaacag tatcaacaatatcagcagcagcagtatgagcaacaatacaagcaacaactgtatcagcag cagcaacagtatcatcaggagcaccagcaaatgcagcagtattctacaaatatcaatggc gcaatccagcatcaaactaatgaaattcagagttcttacaacaaccgtactgcaaaacct ttcataacagaaaatctggtggcaacaccttattctcatggagcaagtgggaccaatcaa gatcctgttggccaaggagagcagatagcttcccgtgatgagcgcatttctactcctgca attaggacaggcctgctctcggactccaggagaaagaataccggcaagcctatgtttact tttaaagaaaccccaaaagtatcacctaaccctgcattgctgaaccttctcaatagaagt gacaaaaaaggttttgagtctggtcctgaagaagactatcttagccttggggcggaagct tgcaatttcctccagtctcaaagacttaaacctaagattcctccaccagttgcgccaaag cctttgatcaaccccaactctcctccttggtctgctcagatagaagcagccaaccaggac gtgcctcagtgtgctgaaaatagtctgtccacacctgctgcagcccccaccacagaaact gcccctgctccagaactagagccaactcctgcacctgcccctgagccttctacccttcct acccctgaggaaaccactgccaatcccaccccagccgagcagcattcatggactctccct gaaccagagtctcaacagcagcctgcacaagtgacatctcaagagacacatggccaggtg atttctgttcagcattgtgagtcctctcaaatggccacatggggtccagtacaggtacaa gcacatcaacagtcagctgcttgttcatggcaatcggctcaagtgcaacctcagaaccca cctccaagtcagtccccaccccagccaccctgggtaacacgtcagtctactcaaagtcaa gcgcagattcaactgagctcaaatacttggacgcctcaggggcaaccatcctggactccg catgaagagcaagcacaacctcagacaaatgctcaaccatcctgggcccaacctcaagag cagcttcagtcacatccacaggttcagccaccatggacactcatgaaggagaagcaacac ttgcagcaaacacaggcatcctggagtcaagcccaagaaccagtacagacacaaccccag aatcaatggatgcaggctccccatacagactctcaacagcagctgccatgggttcaacaa aaacctcaagtacagccaccatgggttcaacaagttcagccagaaatacaaccacaaccc ccttgggttcaacaagttcaaccagaaacacaaccatcttggggacaacagcaacaacat caggcactccctcaagcatgggcaaatgcccaagttccaggtcaacctcaaccaccttgg gtctcaactccacctcaaccgcaacctcctgccagtccatgggcacaatcgcaaacacaa gcccaaactcagccaccatggatgaatgcagctcaagtacaacctcaagcacaggctcaa gttaatctgaatccatgggcaccagttcctgcacacactccagctcagacatcatgggct ccacaacctccagaacatggtggtgagcaacctataaattcatgggctcaggaccaaagt catgcccaacatcagccaccctgggttcaatcagttccttcaccgcccacaccccagtcc aactggcaacagtccctttcaaatacatctcaacaaccacaactcaatacatggccatca gctcaagcccagcctccaacaccagttaatgactggagaccacagctacagcaatcatct ttgaatgttccattatctacagtaaacacccaaccttcacctaaaccatggcacccacca caaaaccagactcctcctcctccgccacgacgaatgttctcttatactgttggtcaaaaa gccgcatcgcctgtcaacccaatggccactgtcttaaatcctaaattgtccccgggtcca gcttttgagatgccagtggtcaaaggaaaaggagctgacatgtttgctaagaggcagtct cgcatggagaagtttgttgtggactctgagactgttgaagccaacaaagcaagtcgttca acatcgccagctgcatccttaccaaatgaatggaagtatacacccaatgtacgtgctccg cctcccagggcttacaatccaattcaatctcctttttatcccctagcagcaacaaaacag ccccctgcaagtagtccttcaatcaaagcaaagaaaaaagatcaggagaaacgagcacct gcccctaaaccactgaatgttattgatgtcatgaagcatcaaccatataaactagattct tcactctttatctttggtgcaggagcagaggctgctaagcctcctgtaccaaagcccagc tcacctcctcacccacttcttgacagccaaacaattagatatgagcaaatggctccatct gaacaagctggaccatttactcctccatatccccagcaaggctatgggatacccatgcag cccgtaatgcatgatccccactatcagcaagcccaaggtaatgtctatccttatcagcca tctcccggtagtccataccaacaagaatataaccagcagtatctgcaggctgttccacca acttatcatccacaagcccctcagcctttaaaccatccttaccagcaggctgcttaccag ccagccagcagccctccctatctggcaactccctcagtaccctacaaaccaccgcctact aataactacatagccccgagttttcctgtggctgctaggcctgaatctgtaactggtggt ggtactgcccccaagcctaaatttactgctaacaagagctcagctcaggtgtggaagcca acagtggttgaaaaagagtga

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