Poecilia reticulata (guppy): 103480793
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Entry
103480793 CDS
T05149
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret02010
ABC transporters
pret04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103480793
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103480793
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pret02000
]
103480793
Transporters [BR:
pret02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
103480793
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DrrA1-3_C
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
103480793
NCBI-ProteinID:
XP_017165741
LinkDB
All DBs
Position
LG18:complement(14586386..14711723)
Genome browser
AA seq
1614 aa
AA seq
DB search
MFLVLAFMYSVCMTIKSLVLEKELRLKEVLRAVGVQNGALWSATFTENIVLLTLPCVLIS
IMLKYGKVLQYSDPSVIFVFLLVFCLATISQCFLISVFFSKANLAAACGGLIFFLLYLPH
SLCYAWRDVMGFGAKVAVSLLSCVAFGYGCENFSKYEEQGVGIQWHNIMRSPQEGDPYTF
IISIAMMLADAVLYWVLTWYIENVFPGQYGIPKPWYFLFTSSYWCGMTPVAENSPDLLTD
SGAHVGYFERPPPSVKAGVSIRNLVKIYKTGKKLAVDGLSVDFYENQITSFLGHNGAGKT
TTMSILTGLFPPTSGTALIHGYDIRTDIDGIRKYLGMCPQHNVLFNELTVEEHIYFYARL
KGRSRSEVDSEMDQMIKDVGLPHKRKDLAKNLSGGMQRKLSVAIAFVGGSKIVILDEPTA
GVDPYARRGIWELLLKYKQGRTIILSTHHMDEADILGDRIAIISQGKMRCCGSSLFLKKC
FGSGYYLTLVRDGTEKMTNQRKNIKQSLSKERQRETARPSRQSPDEGFGSQTWDNSGRTA
DLDAVTRLVRRHVPEAAFLESIGQEITFILPYGGARDGSFATLFSKLDLAMADLGLTSYG
ISDTTLEEIFLKVAEETGVDAEVPSAKEPLVRDWKRSSRESKRNSVASVRAKSEHNGTRE
VKEKFLNKVEDYKKSASLNGRGSMVITGWKLIRTQFVALFIKRFHHARRSRKGLIAQVVL
PAFFVCLSLIFSLIVPPFREYPSLELQPWMYSLPQTTFYSNDMPENLEVSKVTETLLNNP
GFGTRCMHGDPIPGLPCSPKYSDWFTPSVDQSITDIFLNGNWSMANPSPSCQCSTPKRTI
LLPDCPPGAGGLPPPQRVQNTTETLLDLTGRNMTDFLIKTFEDSGKKRYGGISVGAVNSQ
VRLTETEVEDVFRDLKNLFNSSQDNVTDQTLQRAEAVLKKLGTRDNVKVWFYNQAWHGVV
SFLSVANNGILRGNLPKGEDPRRHGISVSNHPLNLTKEQLSSAAMATTSTDVVVSICVIF
AMSFIPASFVLFLIQERVSKAKHLQFVSGVNPTVYWLTNFVWDMCNYIVPCFIVIVIFLC
FQQKAYVSPPNLPALILLLIFYGWAITPMMYPASFVFSVPSTAYVVLTCVNLFIGINGSV
ATFIMELIEDDNITRINDIVKQVLLIFPHFCLGRGLIDMAKNQATATLFINFGEDRFKNP
LSWDMVGKNLLAMSIQRAVMFITTILIQYKFFCKPRLVTPKQSATEEEDVDVARERKRVY
EGRALNDLLKISDLTKVYPGKKTPAVDQLCVGVPAAECFGLLGINGAGKTTTFKMLTGDI
PVSSGEAFLNGYSIRTEMRHVHQNMGYCPQFDAIDDLLTGREHLEFYARLRGVPEDEVAM
VAEWGIQKLGLIKYANKSAGTYSGGNKRKLSTAMALIGCPPVVFLDEPTTGMDPKARRFL
WDCILSVIKEGRSVILTSHSMEECEALCTRMAIMVNGRFKCLGSIQHLKNRFGDGYTVIV
RVGGSPPALRPVEDFVRLTFPDSVLKEKHHNTLQYQLPYTQGALASIFSQFTINQGRLAV
EDYSVSQTTLDQVFVNFARHQHGEDDSQAHSNPVDITDEMPLRSLRRPRGAESA
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgttcctggtgctggccttcatgtactctgtgtgcatgaccatcaaaagcctggtgctg
gagaaggagctgcggcttaaggaggtgctgcgcgccgtcggtgttcaaaacggcgccctc
tggtccgccacgttcacagagaacattgttctgctcacacttccgtgtgtgctcataagt
atcatgctcaagtacggcaaagtcctgcagtacagcgacccctcagtgatctttgtcttc
ttgctggtcttctgtttggccaccatctcccagtgcttcctcattagcgtcttcttctcc
aaggccaatttagcggcggcgtgtggcggcctcatcttctttctcctctacctgccacac
agcctctgctacgcctggagggacgtcatgggtttcggggccaaggtggctgtgagttta
ctgtcatgtgttgcctttggttacgggtgcgagaacttttccaaatatgaggagcaaggc
gtcggtatacagtggcacaacattatgaggagtccccaggagggggatccgtacaccttc
atcatctccatcgccatgatgctcgccgatgccgtcttatactgggtgctaacctggtac
attgaaaatgtcttcccaggtcaatatgggattcctaagccgtggtacttcctgttcact
tcctcctactggtgtgggatgacaccagtagctgaaaacagccccgatctgctgacagac
tctggggcgcacgtcggatattttgaaagaccacctcccagtgtgaaagcgggggtgtcg
attcgcaatcttgtcaaaatctacaagaccgggaagaagctggcggtggacgggctgagc
gtggacttctacgagaatcagatcacatcgtttttgggccacaatggcgctggaaaaacg
accacaatgtcaattctgaccgggctgttcccccctacatcaggcacagccctcatccac
ggatacgacatccgcaccgacatagacggcatcaggaagtatttgggaatgtgtccgcag
cataacgtcctatttaatgaactcactgtggaggagcacatttacttctacgccaggttg
aagggacgcagtcgcagtgaggtcgactccgagatggaccagatgattaaagatgtcggt
ttgccacacaagcgtaaggatcttgctaagaacctctcaggtggcatgcagcgaaaactc
tctgtggcaatagcctttgttggcggttcaaagattgtcatcctggatgaaccgacagca
ggagtagacccttacgctcgccgggggatttgggaactactgctaaaatataaacaaggt
cgcaccattattttgtcaacacaccacatggacgaggcagacatcttaggagaccgcata
gccatcatctctcaaggaaagatgcgatgctgcggctcctcgctcttcctgaagaagtgt
ttcggcagtggctactacctgactctggtcagagacggaacagaaaagatgaccaatcag
cgtaaaaacatcaaacaaagtctgtccaaggagagacaaagggagacagcccgtccttcc
aggcaaagtccagatgaaggcttcggaagtcaaacgtgggacaattctggccgtacagca
gatcttgatgctgtgactcggcttgtgcgccgccacgtaccggaagctgcgtttttggag
agcatcggtcaggagatcaccttcatcctgccctatggtggagccagagacgggtccttc
gccaccctcttcagcaagcttgatctcgctatggctgaccttggcctgaccagctatggc
atctctgacaccacactggaggagatatttctgaaagtggcagaagaaaccggcgtggat
gcagaagtgccatcagcaaaggagccattggttagagactggaaaagaagctcccgcgaa
tctaaaaggaacagcgttgccagcgtccgcgccaaatcggagcacaacgggacgagagaa
gttaaagaaaaatttttaaacaaagttgaagattataagaaaagcgccagcctgaatgga
agaggatccatggtcatcaccggttggaagctgatcagaacgcagtttgtggctctcttc
atcaagcgcttccaccacgcccgacggagccgcaagggactcattgcgcaggtggtcttg
cctgctttcttcgtgtgcctgtctctgatcttctccctcatcgttccaccattcagagaa
tatccgagtctggagctgcagccgtggatgtacagtcttccccaaaccacattttatagc
aatgacatgcctgaaaacttggaggtgtccaaggtgacagaaactttattgaacaaccct
ggttttgggacacgttgtatgcatggagatccgataccaggtttaccgtgttcgccgaag
tactctgattggttcactccatctgtggatcagtcaatcacagacatcttcctcaacggg
aactggagcatggctaacccttcgccttcctgccagtgcagcactcctaaacggacgatt
ttgttacccgactgtccacccggagcgggaggtctccctccgccacagagagtacagaac
acaacagaaactctgctggatttaactggacggaacatgacagacttcttgatcaagact
tttgaggactccggaaaaaaaaggtatggaggcatttctgtgggagcagtcaactcacaa
gtccgtctaaccgagacagaggtcgaggatgtcttcagggatttgaaaaatctttttaac
tcatctcaggataacgtcaccgatcagaccctgcagagagccgaggcggtgctgaagaag
cttggaaccagggacaatgtcaaggtgtggttctacaatcaggcatggcacggcgtggtg
tccttcctaagtgtggccaacaatggcatcctgagaggaaatcttcccaagggagaggat
ccacgccgccatggcatctccgtttctaatcaccccctgaatctcaccaaggagcagctc
tcctctgcagccatggcgacgacctctacagacgtggtggtgtccatctgtgttattttc
gccatgtccttcatccctgccagcttcgtcctctttctaatccaggagagggtgagcaaa
gccaagcatctgcaatttgtcagcggcgtaaacccgaccgtctactggttaaccaatttc
gtctgggatatgtgtaactacatcgtgccctgcttcatcgtgatcgtgatcttcctctgt
tttcaacaaaaagcctatgtttcacctccgaatctgcccgctttgatactgctcctgatt
ttttatggatgggccatcacacccatgatgtacccggcctccttcgtctttagcgttccc
agcacggcttacgtggtgttgacctgcgtcaacctcttcattggcatcaacggcagcgtg
gccaccttcatcatggagctcattgaggacgataacataacccgcattaatgacatagtg
aagcaggtgcttctgatattcccacatttctgtctgggcagaggtcttattgacatggcc
aagaaccaggcaacggcaacacttttcatcaattttggggaagatcgttttaagaatcca
ctgagctgggatatggtgggaaaaaatctccttgccatgtccattcaaagagctgtgatg
ttcatcaccaccattctgatccagtacaagttcttctgcaaaccgaggcttgtaacacca
aagcagtcggctacagaggaggaggacgtcgacgttgcccgggaacgcaagagagtgtac
gaaggcagagctctgaacgacctgttgaagatcagtgacctcacaaaggtataccctggg
aagaaaacccctgctgtggaccagctatgcgtgggcgtgcctgctgcagagtgtttcggc
ctgctggggatcaacggcgctgggaaaaccacgacattcaagatgctgacgggagacatc
ccagtctccagcggagaggcctttctaaacggatacagcattcggacagaaatgagacat
gttcaccagaacatgggttactgtccccagttcgacgccattgatgaccttttgactgga
cgagagcatctggagttttatgctcggctaagaggggtaccagaagacgaggttgccatg
gtggccgagtgggggattcagaagctggggctgatcaagtacgccaacaagtcagcagga
acctacagcggcgggaacaaacgtaaactttccacagcgatggccctgatcgggtgtccg
ccagtggttttcttggatgagccaaccaccgggatggaccccaaagccagacgcttcctt
tgggactgcatcctgagtgtcatcaaagagggacgctcagtcattctcacatcgcacagc
atggaggagtgcgaagcgctgtgcactcgcatggccatcatggtaaacggccgtttcaaa
tgcctcggaagcatccagcatctgaaaaacaggtttggcgatggctacacggtgatcgtg
cgcgttggcggctcccctcctgccctcagaccagtcgaggacttcgtccggctgactttc
ccggacagcgttctcaaggagaaacaccacaacacactccagtaccaactcccatacacg
cagggagctttggccagcatcttcagccagttcaccataaatcagggcaggctggccgtg
gaggactactccgtatcccagacaactctggatcaggtctttgtgaactttgcgcgccac
cagcacggggaggatgactctcaggcccacagcaacccggtcgacatcacggacgagatg
ccgctcaggtcgctgcggagaccccgaggagcggagagcgcctga
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