Poecilia reticulata (guppy): 103480923
Help
Entry
103480923 CDS
T05149
Name
(RefSeq) protein NLRC3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pret04054
]
103480923
Pattern recognition receptors [BR:
pret04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
103480923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
PRY
NOD2_WH
SPRY
LRR_6
LRR_1
LRR_4
AFG1_ATPase
Herpes_U44
Motif
Other DBs
NCBI-GeneID:
103480923
NCBI-ProteinID:
XP_008434346
LinkDB
All DBs
Position
LG2:complement(19377347..19386609)
Genome browser
AA seq
1106 aa
AA seq
DB search
MSPPGLFRTRLSLKNTIGLWEPEJDSGPDSVLQPQPSCLSFRSNQSKSEPLQFKGRFCTS
ELDQHQFFLPRPSSDPESEPSCLSLKSNQTGGWKSHPDLRVDQQSSEVSSGPSAQQHLTQ
LDSIFTELERNMILFTKNELKKIQKVLNPCYPECSESQREDEEVVEDDDVEEQRRRNSTE
ALLKIIVFFLRKMNQEELAERLQSKTPSMCQDNLKFSLKKKFQCVFEGIAKAGSPTLLNQ
IYTELYITEGGTGEVNQEHEVRQIETASRKQHRPETTIRQEDIFKVQHERDQPIRTVMSK
GVAGIGKTMLTQKFTLDWAEGKTNQNIQFIFPFNFRELNVLKEKKFSLVELIHRFFTETK
GISNFEQFQVLFIFDGLDESRLPLNFNNEILTDATESSSVDVLLTNLIRGKLLPSALLWI
TTRPAAAXQIPAECVGMVTEVRGFTDPQKEEYFRKRFRDEKQTRMIISHIKTSRSLHIMC
HIPVFCWITATVLEDVMKTREAGELPSTLTEMYIHFLVVQTKVKKVKYDGGSEIDPHWSP
ESRKMIESLGKLAFDQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFXEEXGLYQDK
VFCFVHLSVQEFLAALHVHLTFINSGINLLEESLREDKESALANLHQSAVDKALQSPNGH
LDLFLRFLLGLSLQTNQRLLHGLLTQKARSLQKNQETVQYIKQKISDNVSVDKSINLFYC
LNELKDCSLQEEIRKYLKSGSLSTDKLSSAQWSALVFILLSSGKDLDEFDLKKYSASEEA
LFRLLPVVKAAKKAVLSGCNLSARSCEALSSVLSSQSTSLRELDLSNNDLEDSGIKQLCH
GLESPCCKLETLSLSGCLISEEGCSSLASALISNTSHLRELDLSYNHPGESGLKLLSISQ
KRPDCRLDTIRAEPGSVQWLKPNFRKYFCELTLDPNTAHKFLKLSENNRKVTDLRKEHPH
PDHPERFDYWPQVLCETGLTGRCYWEVEWVGKVYVAVSYRGIGRNGDSDGSKFGGNDQSW
CLACTDGGYSAWHNNSGTPIPLPSSPAASHRVGVYVDCPAGILSFCRVSGDVVTHLHSFS
TSFTEPLYAGFGYGVKLNSSALLCQL
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgagtccacccggcttgttcagaaccagactttctctgaagaacacaatcggtctgtgg
gaaccagaamttgattctggtccagattctgtccttcagcctcaacccagctgtttgtca
tttcggagcaaccaatcaaagtcagaacctcttcagtttaaaggaaggttctgcacatct
gaactggatcagcaccagttctttctccccagaccaagttctgatccagaatctgaaccc
agttgtttgtctctgaagagcaaccagacaggaggatggaaatcccacccagacctgaga
gtggaccagcagagctcagaggtttccagcggtccgtctgcacagcagcacctaacacag
ctggactctatatttacggagctggagcgaaacatgatcctttttacaaagaaygagctg
aagaagattcaaaaggttttgaatccatgttacccagaatgctcagagagtcagagggag
gatgaggaggtggtggaggatgatgatgttgaagagcagaggaggaggaacagcacagaa
gctttgctgaagatcatagttttcttcttgaggaagatgaatcaggaggaattggccgag
cgtctgcagagcaaaactccttccatgtgtcaggataaccttaaattctccctgaagaag
aaattccagtgtgtgtttgagggaatcgctaaagcaggaagtccaaccctcctgaaccag
atctacacagagctatacatcacagagggagggactggagaggtcaaccaggaacatgag
gtcagacagattgaaacagcatccaggaaacaacacagaccagaaacaacaatcagacaa
gaagacatctttaaagtccaacatgaaagagatcaaccaatcagaacagtgatgtcaaag
ggagtggctggcattgggaaaacgatgttaacacagaagttcactctggactgggcggaa
ggcaaaaccaaccagaacatccagttcatatttccattcaatttcagagaactgaatgtg
ctgaaagagaaaaagttcagcctggtggaactgattcatcgattctttactgaaaccaaa
ggaatcagtaactttgaacagttccaggttctgttcatctttgatggcttggatgagagt
cgacttccactgaacttcaacaacgagatactgactgatgctacagagtccagctcagtg
gatgttctgctgacaaacctcatcagggggaaactgcttccctctgctctcctctggata
accacacgacctgcagcagccartcagatccctgctgagtgtgttggcatggtaacagag
gtcagagggttcactgacccccagaaggaggagtacttcaggaagagattcagagatgaa
aagcagacaagaatgatcatctcccacattaagacatcacgaagcctccacatcatgtgt
cacatcccagtcttttgctggatcactgctacagtcctagaggatgtgatgaagaccaga
gaggcaggagagctgcccagcaccctgactgagatgtacatccacttcctggtggttcag
accaaagtgaagaaggtcaagtatgatggaggatctgaaatagatccacactggagtcca
gagagcaggaagatgattgagtctctgggaaaactggcttttgatcagctgcagaaagga
aacctgatcttctatgaatcagacctgacagagtgtggcatcgatatcagagcagcatca
gtgtactcaggagtgttcacacagatctttakagaggagaragggctgtaccaggacaag
gtgttctgcttcgtccatctgagtgttcaggagtttctggctgctcttcatgttcacctg
accttcatcaactctggtatcaatctgcttgaggaatctttgagagaagataaagaatca
gcactggctaatttacatcagagtgctgtggacaaagcattacagagtccaaatggacat
ctggacttgtttctccggttcctcctgggtctttcactgcagaccaatcagagacttcta
catggtctcctgacacagaaggcaagaagcttacagaaaaaccaggaaacagttcagtac
ataaagcaaaagatcagtgacaatgtgtctgtagataaaagcatcaacctgttctactgt
ctgaatgagctgaaggattgttccttacaagaggagatcagaaagtacctcaaatcagga
agtctctccacagataaactgtcttctgctcagtggtcagctctggtcttcatcttactg
tcatctggaaaagatctggatgagtttgacctgaagaaatactctgcttcagaagaggct
cttttcagactgctgccagtggtcaaagctgctaagaaagctgtgttgagtggctgtaac
ctgtcagcaagaagctgtgaagctctttcctcagttctcagttcccagtcaactagtttg
agagagctggacctgagtaacaacgacttggaggattctgggataaagcaactgtgccat
ggactggagagtccatgttgcaaactggaaactctcagtctttcaggctgtctgatctca
gaggaaggctgttcctctctggcttcggctctgatctccaacacatcccacctcagagag
ctggacctgagctacaaccatccaggagagtcgggactgaagctgctctcaatcagtcaa
aagagacctgactgcagactggacaccatcagagctgaacctggttctgtccagtggttg
aagccaaacttcagaaaatacttctgtgagctcacactggacccaaacacggctcacaag
ttcctcaaactgtctgagaacaacaggaaggtaaccgacctgcggaaggaacacccacac
cctgatcacccagaaagatttgactactggccccaggtgctgtgtgaaactggtttgact
ggtcgctgctactgggaggttgaatgggttggaaaggtttatgtagcagtgagctacaga
gggattggaaggaatggtgacagcgatggctccaagtttggagggaacgatcagtcttgg
tgtcttgcctgcactgatggcggatacagcgcttggcacaacaacagcggtacacccatt
cctcttccttcctckcctgctgcctctcatcgtgtaggagtctatgtggactgtcctgct
ggcatcctgtccttctgcagagtctccggtgatgtagtgacccacctccacagcttcagc
acctcattcactgaaccgctctatgctggctttgggtacggggtcaaactgaactcctct
gctcttttgtgtcagctgtag
DBGET
integrated database retrieval system
