Poecilia reticulata (guppy): 103480970
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Entry
103480970 CDS
T05149
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04140
Autophagy - animal
pret04148
Efferocytosis
pret05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103480970 (vps16)
04148 Efferocytosis
103480970 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103480970 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103480970 (vps16)
Membrane trafficking [BR:
pret04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103480970 (vps16)
Hops complex
103480970 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
103480970
NCBI-ProteinID:
XP_008434411
UniProt:
A0A3P9P2L7
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All DBs
Position
LG2:19301711..19308264
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AA seq
834 aa
AA seq
DB search
MAFITANWNPLGDAFYRKTELYEMFWSLRDGLRDSLVAAAPYGGPIALLREPLRRSPSTR
PQLEIYSASGASITSFPWKSGPVVYLGWSVNDELLCVQEDGTVLIYDLFGSFKRHFSMGQ
EVVQSQVLEAKVFHSPYGTGVAIVTGSSRFTLATNIEDLKLRRLPEVAGLQGRPSCWAVL
TQDRQTKVLVSSGPELYVLDNTSCTAVYPPGLSPQAGSIVHMSVSFSYKYLALFTETGRL
WTGLSNLQERLSEVDTKQAATPKQMVWCRRPRSQQPSVVLMWDRLLLVVGSCNDTIQFPL
EDQSVLVGELDGVRIIGSSSHELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQNVLGDAVRQCVEAAAHEYDPDTQKALMRAASFGKCFLTEFSPDQFVTTCR
ELRVLNAVRESSVGMPLTHTQFKQMTLQVLIDRLVYRQFYPLAIEVCRYLKIPDYQGVSR
VLKHWASCKVQQKDLTDEAIARAVCAKVGDSPGVSYSDIAAKAYECGRPELAIKLLDFEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEPQTLKDLYNQDDDHQELGNFYVTSSYRDKRLEGRLAQLQSAVDEYNKAKND
FAAKATEEEMRLLRFQRKLDDEKGAGLLGLSLQATMEALMSLGLHKQAEQLYRDFRVPDK
RYWWLKLKSLAEKEQWEELEKFSKSKKSPIGYLAFVEVCMKNNNRHEAKKYVSKVTPEQK
VKAHLAVGDLEGAADAAIERRNEAEMGAVLSRCSASDRLLMDKLNRARVAAAKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggccttcatcaccgctaactggaacccgctgggagacgccttctaccggaagacggaa
ctctatgagatgttctggagcctccgggacggactgagggacagtctggttgcagcagct
ccgtatggaggcccaatcgctctgctcagagagccgctcagacgttcccccagcactcgt
cctcagctggagatctactccgcctccggagcgtccatcaccagcttcccttggaagagc
ggtccggtggtctacctgggctggtccgtcaacgacgagctgctgtgtgttcaggaggac
gggacggttctgatctacgacctgtttgggtccttcaagagacattttagcatgggacag
gaagtggtccagagtcaggtgttggaggccaaggtgttccactcgccgtatggaacaggc
gtcgctatagtaacgggttcctcccgctttaccttggcaaccaacatcgaggacctgaag
ctgcgcaggctacctgaggtcgcaggtctccagggcaggccatcctgctgggccgtcctc
actcaggacagacaaaccaaagtcctggtgtccagtggacctgaactctacgtcctggac
aacacgtcctgcacggctgtgtatcctccaggtctcagtcctcaggctggcagcatcgtc
cacatgtcagtctccttcagctacaaatacctggctctgttcaccgagacagggcgcctg
tggaccggcttgtccaacctacaggagagactgagtgaggtggacaccaaacaggcagcg
acgcccaaacagatggtctggtgccgcaggccgaggtcccagcagccctcggtggtgttg
atgtgggaccggctcctcctggtggtgggatcttgtaacgacaccatccagttccccctg
gaggaccagtcggtgctggtgggtgaactggacggggttcggatcattggctccagcagc
cacgagctgctgcaggaggttcctctggtctgccaagatatcttcaagatcgcctccatg
gctcctggagcgctgctgctggaggcccaccgggagtacgagaagtccagtcagaaggcg
gacgagtacctgagggagatcaaggagcagaacgtcctgggagacgccgtccggcagtgt
gtggaggcggccgctcatgagtacgaccccgacacccagaaggccctgatgagggcggcg
tccttcgggaagtgcttcctgacggagttcagcccggatcagtttgtgacgacatgcagg
gagctgcgggttctgaacgccgtcagagagagcagcgtgggaatgccgctcacacacact
caatttaaacagatgacccttcaggtcctgatagacaggctggtctaccggcagttctac
cctctggccatcgaggtctgtcgctacctgaagatcccagactaccagggagtcagtcga
gtcctgaagcactgggcgtcctgcaaggtgcagcagaaggacttgaccgatgaggccata
gcccgagccgtctgcgccaaggtgggagactcacctggagtttcgtactcggacattgca
gctaaagcgtatgaatgtggacgaccggagctygccatcaagctgctggacttcgaggca
cggtccggagagcaggttcctctgctgctgaagatgaagaggagccagctagctctcagt
aaagccgtggagagcggcgacaccgacctggtttacacggtggtgacgtacctgaagaac
gagatgaacagaggagatttcttcatgaccctgaggaaccagccggtggcgctcagcctc
tacagacagttctgcaaactgcaggagcctcagacgctgaaggacctgtacaaccaggac
gacgaccaccaggagctcggcaacttctaygtgacgtccagctacagggacaagaggctg
gagggtcggctrgcgcagttgcagagcgccgtggacgagtacaacaaggccaagaacgac
tttgctgccaaggccacggaggaggaaatgcgtctccttcggttccaaaggaagctggat
gacgagaagggggcggggcttctgggactctccctgcaggccaccatggaggctctgatg
tcgttggggctccacaagcaagcagagcagctctacagagacttcagagtgccagacaaa
aggtactggtggctgaagctgaagtctctggctgagaaggagcagtgggaggagctagag
aagttctccaagagcaagaagtctcctattggctacctggccttcgtggaggtgtgcatg
aagaacaacaacaggcatgaagccaagaagtacgtcagcaaggtcacacctgagcagaag
gtcaaagctcacctggctgtgggtgacctggagggggcagcggatgccgccattgagcga
aggaatgaagctgagatgggggcggtcctctccagatgctcygcctccgacmggctgctg
atggacaagctgaaccgggccagggtcgccgccgccaagaagtga
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