Poecilia reticulata (guppy): 103481029
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Entry
103481029 CDS
T05149
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103481029 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103481029 (gspt1)
03012 Translation factors [BR:
pret03012
]
103481029 (gspt1)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
103481029 (gspt1)
Translation factors [BR:
pret03012
]
Eukaryotic type
Release factors
103481029 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
103481029
NCBI-ProteinID:
XP_008434479
LinkDB
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Position
LG19:complement(779706..789922)
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AA seq
586 aa
AA seq
DB search
MDSRDTAPDSWEQEEDAEAPAPAAELPAAFAALNVNAKPFVPNVNAPVFVPSFLQASSAG
IPASDGSPEPAASMEVTDAAAPVENGNTEADMAAEEETWEQKEEPGGGEGGGGQEELGTE
GGGEEGGAAGREDEEMMEEEEEEIPLPKVAPPPSDAPKKEHVNVVFIGHVDAGKSTIGGQ
IMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKH
FTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVK
HLIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDPV
AECPWYTGLPFISHLDSLPNFNRSSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLV
MMPNRHTVEVLSLLSDDVETDDAGPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRTF
DAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVC
IARLRAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggactcgagagacacagccccagattcatgggagcaggaggaggatgccgaggccccg
gctcccgcggcggagctcccagccgccttcgccgccctcaatgtgaacgccaagccgttc
gtccccaacgtgaacgccccggtgtttgtgccgagcttccttcaggccagcagcgccgga
atcccggcttcagacggttctccggagccagctgctagcatggaggtgacggacgcagcc
gcaccagtggagaacggaaacacagaggctgacatggcggcggaggaggaaacgtgggag
cagaaggaggagcccgggggaggcgagggaggcggcgggcaggaggagctgggaacggag
ggaggcggcgaagaaggcggcgccgcggggagagaggatgaggagatgatggaggaggaa
gaggaggagatccccctccctaaggtggccccgccgccgtctgatgcccccaagaaggaa
cacgtgaacgtcgttttcatcggtcatgtcgatgctggtaaatccaccatcggagggcag
atcatgtacctcactgggatggtggacaagcgaacgctggagaaatacgaacgagaggcg
aaggagaagaacagggagacatggtacctgtcgtgggctctggacaccaaccaggaggag
agagacaagggcaagacggtggaggtggggagggcttactttgagacggagaagaaacat
ttcaccatcctggacgcgccgggacacaagagcttcgtccccaacatgatcggcggcgcg
tcgcaggccgacctggcggttctggtcatttcggccagaaaaggcgagtttgagacgggc
tttgagaagggcggccagacgcgggagcacgccatgctagctaaaacagccggcgttaaa
catctgatcgttctggtcaacaagatggacgaccccaccgtgaactggagcctcgaaagg
tatgaggagtgtaaagagaagctggtgccatttttaaagaaggtgggcttcaacccaaag
aaggacatccacttcatgccttgctccggactcacaggtgccaacctcaaagacccagtg
gccgagtgtccctggtacacgggtctgcccttcatctcccacctggacagtttgccaaac
ttcaacagatccagcgacgggcctgtcagactaccgatagtggacaagtacaaggacatg
gggacggtgatcctggggaagctggagtccggctccatcagtaaggctcagcagctggtc
atgatgcccaacaggcacacggtggaggttctgagcctgctgagcgacgacgtggagacg
gacgacgccgggccgggggagaacctgaagctgcggctcaaaggaatagaagaggaggag
attctgcccggcttcatcctctgcagccccgacaacctgtgccactcgggccgcaccttc
gacgctcagatcgtcatcattgagcacaagtccatcatttgtcccggttacaacgcggtg
cttcacatccacacctgcatcgaagaggtgcagatcacggcgctgatctgcctggtggat
aagaagacgggcgagaagagcaagacgcggccgcgcttcgtgaagcaggaccaggtgtgc
atcgcccggctgcgggccgcaggcgtcatctgcttagaaaccttcaaggatttcccccag
atgggacgcttcactctgagagacgaagggaaaacgatcgccatcggcaaagtgctgaag
ctggttccagagaaggactaa
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