Poecilia reticulata (guppy): 103481092
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Entry
103481092 CDS
T05149
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pret03037
]
103481092 (ift140)
Cilium and associated proteins [BR:
pret03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
103481092 (ift140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_Prp19
Beta-prop_EML
TPR_IFT80_172
ANAPC4_WD40
WDR55
TPR_COPA_B
Clathrin
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
TPR_GEMI5
PEP5_VPS11_N
PPR_1
Beta-prop_ELP1_2nd
Rax2
Motif
Other DBs
NCBI-GeneID:
103481092
NCBI-ProteinID:
XP_008434588
LinkDB
All DBs
Position
LG19:1739318..1782020
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AA seq
1441 aa
AA seq
DB search
MAVYFDHRIEAPDRSNLPSHLTWHATLPILAVASSSPASGGSVDLYLQQGECVKSCHVDR
AQPAAALRWHPVKPVLVLGWESGEVVLLTHPSGDQTVLPAVHAARIALLEWSGSGSRLVT
GDQNGALAVWKLDARGRLVGNHLVKHDYNKPLTCCIFKPASPGVDVAMLARASVSGDESA
LDMFSWKGAPLKMGPQEGLGFYVSTADGKVHAVDEQGRTSPLLSEDGAIRKLFYLDKRGV
LVVVTDTLMLSQYTLRPEGGAHESMKVKLSSTAGQNVDIIWTENSLLVTATGEPVVKVWD
LERDENYVLSLDETLGFKKGEMINCVSYCAAKEILAAGTSKGRIAMWKTATQPMSSSSYR
ADAKALWKLQTPTEIHGNVTQLQWGSNQNLLAANNSRTVLILSEHVMSAHFGQQVAAVQL
APTQLSITNFSSGETLPLQCDMHIRGVCVSKDSVTVWNGKHISVYELSGTALHVTGSFPC
DSHIVAVHDENLYTVEPSRVQIRTPQGTVKQLLTFSRAEGNPVLLDVCQLYLAVGTDTAH
IRVYDLSRRDAKAHCGAKNLSDHISGLGALRSVKCNASGSQVSLLASQVNGRPDHKVYFY
DIEMDTVTHFDFFTGRPSSGVSAPDESDKQKFQENEISGRFPVSHYWDENEPRLFVCETA
PIGSEKSANAFSDLEDVSVVTLFCTQEHGLLLQDCFSRPPGLQALLALDVPYYYFTCKPG
EQNPEVSPPDQPIRAAPASPPLMASRRPLRDFVGLEKCEKGTRDAMLNFSFYLSVGDMDE
AFKSIKLIKSKAVWENMARMCVKTRRLDVARMCLGNMGNARAAKAVKEAEAEPEPEAQVA
MLAIQLGMLEDAEKLYKSCHRYDLLNAFYQASSEWQRALETAEAHDRIHLRTTYYSYAKY
LESTGHKNLALTYYEKSDTHRVEVPRMLQDDTASLELYVTKAKDKNIYKWWAQYLESQSN
METALLFYERAQDYLSLVRVHCYLGNIPEASQIANNTGDRAASYHLARHYEGHDDIKQAV
HFYTRAQAYNNAIRLCKENGLDDQLMNLALLSNPEDMMEAACHYEEKGKHLDRAVALYHK
AGYVSKALELAFATEQFAALQLIAEELNENSDPALLARCSDFFVQHAQYEKAVELLAAAK
KYPQAVELCLTHNLTITEDLAERMTVTDAKDLTEEAGKALLEKIADCCMSQGSYHLATKV
YTQAGNKHRAMKALLKSGDTDKIAFFANVSRQKELFIMAANYFQSLDWRKNPKNLKRIIE
FYTKGKAPDLLGGFYEACAQVEIDDYQNYEKALDALMEAFKCLSKAKDASSGQQEVRLAD
LQHKIVLIKKFVHIRRLHPEDPDEAVRLCEALLEEPELDPAVRVGDAYGFLIDHHCQQGR
LQTAYQKLEELQKLLPTQSIRFYISQANLDALQKEMGFPLESGDHKHVLREDDEVEEDLT
A
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtatttcgaccaccgcatcgaagcccctgacagaagcaatctgccgtctcac
ctgacctggcacgccacgctccccatcctggctgtggcgtcgagcagccctgcttccggt
ggcagcgtggatctttacctgcagcagggtgagtgtgtgaagagctgccatgtggaccgg
gcccagccggccgccgcgctgcgctggcatcccgtaaagccggttctggttctgggctgg
gagagcggggaggtggtgctgctcacgcatccgtccggggatcagaccgtgctgccggcc
gtccacgcggcccgcatcgcgctgctggagtggagcggctccgggagccgcctggtgacc
ggagatcagaacggagctctggccgtgtggaaattagatgccagagggcgacttgtggga
aatcacctcgttaagcacgactacaacaaacctttaacctgctgcattttcaagcctgcc
tctcctggggtcgacgtggcgatgttggcgcgggcgtcagtgagcggtgacgaatcggct
ctggacatgttcagctggaagggggcgcctctgaagatgggccctcaggagggactgggc
ttctacgtcagcaccgccgacggaaaggtccatgccgtggacgaacagggcagaacgagc
ccgctgctgagcgaggacggcgccatcaggaagctcttctacctggacaagagaggcgtg
ctggtggtcgtcacggacaccctgatgctgtcgcagtacacactgagaccagaagggggc
gctcacgagtccatgaaggtgaagctgagcagcacagccgggcagaacgtcgacatcatc
tggaccgagaacagcctcctggtcacagcgacaggagaaccggtcgtcaaagtttgggac
ctggagagagacgagaactacgttctatctctggacgaaactctgggctttaagaaggga
gagatgatcaactgtgtttcctactgcgcagccaaagagatcctggcagctggaacctcc
aaaggccgcatagcgatgtggaagacggcgacacagccgatgagcagcagcagctacaga
gccgacgctaaagccctgtggaagctgcagactcccactgagatccacggaaacgtcacc
cagctgcagtggggctccaatcagaacctgctggccgccaacaactccagaacggttctg
atcctcagtgagcatgtgatgtcggcgcacttcggccagcaggtggcagcagtgcagctc
gccccgactcagctcagcatcacgaacttcagcagcggagagacgcttcctctgcagtgc
gacatgcacatcagaggagtgtgcgttagcaaggactctgtgacggtctggaacgggaaa
cacatctccgtctatgagctctcaggcacggctctgcatgttacaggatcttttccttgt
gattcccacattgttgctgttcatgacgagaacctttacacggtggaaccaagcagagtc
cagatccgaacacctcaggggacagtgaagcagctgctgaccttctcccgggccgaggga
aaccccgtgctgctggacgtgtgccagttgtacctggcagtaggaacggacacggcgcac
atcagagtttacgacctctccagacgagacgccaaagctcactgcggcgctaagaatttg
tccgaccacatcagcggcctcggcgccctgaggtccgtcaaatgcaacgccagcggcagc
caagttagcctgctagcctcccaggttaacggacgacccgatcataaagtatatttctac
gacattgagatggacaccgtgacgcactttgacttcttcaccggcagaccgtcctctggc
gtctctgcgcctgatgaaagcgataagcaaaagtttcaggaaaatgaaatcagtggccgt
tttcctgtgtcccactactgggatgagaacgaacctcgactctttgtctgcgagacggcg
ccgatcggctcggagaaatcagccaacgctttctcagatttggaggacgtgtcagtggtg
acgctcttctgtacgcaggaacacggactcctgctccaggactgcttctccaggcctcca
ggccttcaggccctcctcgccctggatgtgccatactactacttcacctgcaagccaggt
gagcagaacccagaggtgtctccaccggatcagccaatcagagcggctcctgcttcgccc
cccctcatggcgtccaggcgacctctcagagacttcgtgggcctggagaagtgtgagaag
ggaacgcgggacgccatgttgaacttcagcttctacctgagcgtgggcgacatggacgaa
gccttcaagtccatcaagctcatcaaaagtaaagcggtgtgggaaaacatggcacggatg
tgtgtgaaaacccgccggctggacgtggcccgaatgtgcctggggaacatggggaacgcc
agggcagcgaaagccgtgaaggaggcggaggctgagcccgaacccgaagcccaggtggcc
atgttggccattcagctcggcatgctggaagatgcagaaaagctgtacaagagctgtcat
cgctacgacctgctgaacgccttctaccaggcctccagcgaatggcagcgagctctggag
acggccgaggcccacgaccgcatccacctgcgcaccacctactacagctacgccaagtac
ctggagtccacgggccacaagaacctggcgcttacttattatgagaaatcagacactcac
cgagtcgaggttcccagaatgctgcaggatgacacggcgtcgctggagttatacgtcacc
aaagccaaagataagaacatctacaagtggtgggcccagtacctggagagccagtccaac
atggagacagcgctgctgttctacgagcgcgcgcaggactacctctccctggtccgagtc
cactgctacctgggcaacatcccggaggcgtctcagatagccaacaacacaggtgacaga
gcagcatcgtaccacctggccagacattacgagggtcacgacgacatcaagcaggcggtc
cacttctacacccgggcccaggcctacaacaacgccatacgactctgcaaggagaacggt
ctggatgaccagctgatgaacctggcgctgctcagcaacccggaggacatgatggaggcg
gcctgccactacgaggagaagggcaaacacctggaccgggccgtggcgctctaccacaag
gccggttacgtctccaaagcgttggagttggcgttcgccaccgagcagtttgctgcgctg
cagctcatcgcggaggagctgaatgaaaactccgaccctgcgctcctcgctcgctgctcc
gacttcttcgtccaacatgcccagtatgaaaaggcggtggagttactggcagcggccaag
aagtatcctcaggcggtggagctgtgcctgacccataacctgacgatcaccgaggacctg
gctgagaggatgacggtgacggacgccaaggatctgacggaggaggccggcaaggctctg
ctggagaagatcgccgactgctgcatgagtcagggcagctaccacctggccaccaaggtg
tacacacaggccggcaacaagcacagggccatgaaggcgctgctgaagtcgggcgacacg
gataaaatcgctttctttgccaacgtttctcgtcagaaggagcttttcatcatggccgcc
aactacttccagtccctggattggcgcaaaaacccaaagaacctgaagagaatcattgag
ttttacactaaaggcaaagcgccggacctgctgggcggcttctacgaggcttgtgctcag
gtggagatagatgattaccagaactatgaaaaggctctggatgctttgatggaggcgttt
aagtgtctgtccaaagcgaaggacgcttcctctggacagcaggaagtgaggttagccgac
ctgcagcacaagatcgtcctcatcaagaagttcgtccacatacgcaggctgcacccggag
gacccagacgaggcagtcaggctgtgtgaggccctgctggaggaaccagagttggaccca
gccgtccgggtcggagacgcctacggctttctgatcgatcatcactgtcagcagggacgc
ctgcaaacggcgtatcagaagctggaggagctgcagaagctgctgccgactcagagcatc
aggttctacatcagccaggccaacctggacgctctgcagaaggagatgggcttccctctg
gagagcggcgaccacaaacacgtcctgcgggaggacgacgaggtggaggaggacctgaca
gcgtga
DBGET
integrated database retrieval system
