Poecilia reticulata (guppy): 103481892
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Entry
103481892 CDS
T05149
Symbol
sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103481892 (sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103481892 (sf3b1)
03036 Chromosome and associated proteins [BR:
pret03036
]
103481892 (sf3b1)
Spliceosome [BR:
pret03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
103481892 (sf3b1)
Complex B
103481892 (sf3b1)
Complex C
U2 SnRNP specific factors
103481892 (sf3b1)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
103481892 (sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
Motif
Other DBs
NCBI-GeneID:
103481892
NCBI-ProteinID:
XP_008435911
UniProt:
A0A3P9Q4T4
LinkDB
All DBs
Position
LG2:23304952..23320747
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AA seq
1315 aa
AA seq
DB search
MAKIAKTHEDIEAQILEIQGMKASLQEENGEQGVGLVSTGFYDQEIYGGSDSRFAGYVTS
IAANEQEDDDEDDTSTSLLGQKKPGYHAPVAILNSIPQSDEQYDPFAEHRPQKIADREDE
YKARRRQMIISPERLDPFADGGKTPDPKLQVRSYVDVMMEQNLSKEEREIRLQLAEKAKS
GDLKAVNGSAASQAAAKRKRRWDQTADQTPSNATPKKLSSWDQADAAAETPGHTPAHTPS
NSRWDETPGRPKGSETPGATPSTRMWDPTPSHTPAGAATPGRDTPGHATPGHGGATGSVR
KNRWDETPKTERETPGHGSGWAETPRTDRGEESVGETPTPGASKRKSRWDETPASQMGSS
TPLLTPGKTPLGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLTDEELDAMFP
EGYKVLPPPAGYVPIRTPARKLSATPTPIGGMTGFHMQAEDRTTKQMNDQPSGNLPFLKP
DDIQYFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAG
PLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYA
RVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLK
AVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAI
AALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREV
MLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRN
YRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLE
EQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQ
QAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKM
TPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAH
KKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVL
PALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAS
AVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVALGPCRMLQY
CLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPQVYNDEKNVYVRYELEYVL
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaaaacacacgaagatatcgaggcccagatcctggagatccagggg
atgaaggccagcctgcaggaggagaatggcgagcagggcgtgggtctggtctccactggc
ttctacgaccaggagatctacggcggcagcgacagccgctttgctggatatgttacttca
atcgcagccaatgagcaggaggacgacgatgaagacgacacgtccactagcctactgggg
cagaagaaacctggctaccacgcgccggtggcaatactcaactccatccctcagtcggat
gaacagtacgacccgttcgcagaacatcgtccgcagaagatcgccgatcgggaggacgag
tacaaagcccgccgcagacagatgatcatctcgcccgagcgtctcgacccttttgctgac
gggggcaaaacaccggaccccaagctgcaggtcaggtcgtatgtagacgtgatgatggaa
cagaacctgtccaaagaggagagggagattcgtctgcagctggcagagaaggccaagtcg
ggggatctgaaagctgtcaatgggtctgctgcctcccaagctgctgccaaacgaaagcgc
cgctgggaccagacagctgaccaaactccgtccaacgccacacccaaaaaactgtccagc
tgggaccaggcagacgccgcggctgagactccaggacacactcctgcacacacaccttcc
aacagccgctgggacgaaactcccggccgcccgaagggcagtgagaccccaggggccacg
cccagcacccgtatgtgggaccccacccccagccacaccccagccggggccgccacgcct
ggccgggatacgccaggccaygccacacccggccacggcggcgccacggggagcgtccgc
aagaaccgctgggacgaaaccccaaagacggagcgcgagacgccgggacacggcagcggc
tgggccgagacgccgcgcacggacagaggggaggagtcggtgggggagaccccgaccccg
ggagccagcaagaggaagtctcggtgggatgaaacacccgccagccagatgggctcctcc
acaccgctgctgacgcctggaaaaactccattaggaacaccggccatgaacatggccaca
ccgacacccggacacctgatgagcatgaccccggagcagctccaggcctggaggtgggaa
cgggagattgatgagaggaaccgacctctgaccgacgaagagctggacgccatgttcccg
gaaggatacaaggtgttgcctcctccagcggggtacgtaccaatccgcaccccggcccgt
aagctgtcggccactcccaccccaatcggaggcatgacgggcttccacatgcaggcagag
gaccggaccaccaagcagatgaacgaccaaccctctggaaacctccccttcctcaaacct
gatgacattcagtactttgacaaactgctggtggaggtggatgaatcaactctcagcccc
gaggaacagaaggaaaggaagatcatgaagctgctgctgaagatcaagaatggaactcca
cccatgagaaaggccgctctgcgccagataactgacaaagctcgagagttcggagcaggt
ccgctcttcaaccagatcctgccgctgctcatgtcccccaccctggaagaccaagagcgc
catctgctggtcaaagtcatcgaccgcatcctctacaaactggacgacttggtccggccg
tacgtgcacaagatcctggtggtgattgagccgctgctgatcgatgaggactactacgcc
agagttgaaggcagagaaatcatctccaacttggcaaaggctgccgggttggccaccatg
atctctacgatgcgacccgatatcgacaacatggacgagtacgtcagaaacacgaccgct
cgagccttcgccgtggtggcctccgccctcggcattccctcgctcctccccttcctcaaa
gccgtgtgcaaaagcaagaagtcgtggcaggccagacacacgggcatcaagatcgtgcag
cagatcgccatcctgatgggctgcgccatcctgcctcacctgcgcagcttggtggagatc
attgaacacggtctggtggacgagcagcagaaggtgaggaccatcagcgctctggccatw
gctgccctggcygaggccgccactccctacggcatcgagtcatttgactctgtgctgaag
ccgctgtggaagggcatccggcagcacagaggaaagggtctggctgcgttcctcaaagct
atcggctacttgatccccctgatggacgccgaatacgccaactactacaccagggaggtg
atgctgattctcatcagagagttccagtcacctgatgaggagatgaagaagattgtgctg
aaggtggtgaagcagtgttgtggcaccgatggtgtagaagcaaactacatcaaaactgag
atcctgcccccgttcttcaagcacttctggcagcacaggatggctctggacagacgcaac
tacaggcagctggtggacaccactgtggagctggctaacaaagtgggagcagccgagatc
atttcccgcattgttgacgacctgaaagacgaggcggagcagtacaggaagatggtgatg
gagaccatcgagaagatcatggggaacctgggagcsgctgacatcgaccacaagctggag
gagcagctgatcgacggcattctgtacgccttccaggagcagactacagaggattctgta
atgctgaatgggttcggtacagtggtgaacgccctggggaagcgcgtgaagccgtacctg
cctcagatctgcggtacggtcctatggcgtctcaacaacaagtcggccaaagtccgccag
caggcggccgacctcatttcccgcacggcggtggtgatgaaaacctgtcaggaggagaag
ctgatgggtcacttgggcgtagttctgtacgagtacctgggagaggagtaccccgaggtc
ctgggcagcatcctgggagcgctgaaggccatcgttaatgtcataggtatgcacaagatg
actccgccaatcaaagacctgcttcctcgtttgacgcccatcctgaagaaccggcatgag
aaggtccaggagaattgcatcgacctggtgggccggattgctgataggggtgccgagtac
gtgtcagccagagagtggatgaggatttgctttgagttgctggagttgctcaaagctcac
aaaaaggcaatccgcagagctaccgtcaacacgtttggttatattgccaaagccatcggg
cctcatgacgtgttggccactctgctgaacaacctgaaggtccaggagcgtcagaaccgc
gtgtgtaccaccgtggccatcgccatcgtggcggagacctgttcgcccttcacggtgctg
ccggcgctcatgaacgaatacagagtgcctgagctgaacgtgcagaacggcgtcctgaag
tcgctatcgtttctgttcgagtacatcggagaaatgggaaaagactacatctacgctgtc
acgcctctgctggaggacgcattaatggacagagatttggtccacaggcagaccgccagc
gccgtcgtccagcacatgtctctgggtgtctacggttttggctgtgaagactctctcaac
catttactgaattatgtgtggcccaacgtttttgagacgtctccccacgtcatccaggct
gttatgggcgccctggaggggctgagagtggccctcggcccctgccgcatgctgcagtac
tgcttacagggtctgttccatccggcccggaaggtgagagacgtctactggaagatttac
aactccatctacattggttcccaggacgccctgattgctcattacccacaggtctacaac
gatgagaagaacgtctacgtccgctatgagctcgaatacgttttgtaa
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integrated database retrieval system
