Poecilia reticulata (guppy): 103482163
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Entry
103482163 CDS
T05149
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X3
KO
K10858
DNA mismatch repair protein PMS2
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03430
Mismatch repair
pret03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103482163 (pms2)
03460 Fanconi anemia pathway
103482163 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pret03400
]
103482163 (pms2)
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
103482163 (pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
103482163
NCBI-ProteinID:
XP_008436367
UniProt:
A0A3P9NAQ8
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Position
LG19:complement(28240221..28250045)
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AA seq
822 aa
AA seq
DB search
MSDVCTSEPAGAIRAIDKHSVHRICSGQVVLSLATAVKELVENSIDAGATNVEVKLKECG
AEQIEVSDNGKGVEEANFEGLALKHHTSKLRDFSDLIHVETFGFRGEALSSLCALSDLSV
ITCHGSSQVGTKLVFDHKGHLVQQSPCPRQQGTTVTLQQLFYTLPVRHKEFQRNIKKEFA
KMIHVLQAYCIVSTGVRITCSNQTGQGKRSAVLSTGGSHSMRDDIGAIFGPKQLQSLLPF
RQVSPSENIMEEYGLKDGDLPKQLFTISGFVSTGDHGVGRSASDRQFFFINSRPCDPVKV
SKLVNEVYHMYNRHQYPFVALNIAVASDCVDVNVTPDKRQIFLQEEKLLLAILKSSLINM
YEAGVNKISLNNTLTVSSASKEVHHPVEDKAEPAETNQPGTPSPKSTMNLAAFKAAFSNQ
NSALSGSRSSTEKASKSGPSQKTLQCFFKSSVKSPVQPRTEAAKGSFGARAESFSLSVRK
NDSERGLAVESPDPQHPVSSRPVVKNVTHDSSVSQNLPEDPEFQAEARSPVEDCVIIPEA
KRARRDDPYFTAERTPDTASSTADVPVCLQRRTVPLHFCLQALAAGMKRLQQQQQRRRAA
DRLRYRRFRANISPGENQRAEDELRREISKDMFKEMEIIGQFNLGFIITKLNSDIFMIDQ
HATDEKYNFEMLQQHTVLQGQRLIVPQKLHLTAVSENVLLENVEIFQKNGFEFLIDEDAQ
VMERVKLVSLPTSRNWTFGPADIEELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGT
ALSVGEMKKLVIHMGEIEHPWNCPHGRPTMRHLANLEIISQD
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgtttgcacttctgagcctgctggagccataagggccatcgacaagcactca
gtgcatcggatctgctctggacaagtagtcctgagtctggccacggccgtcaaagagctg
gtggagaacagcattgatgcaggagcaaccaacgttgaggtcaagctgaaggagtgtggt
gctgaacaaatagaagtgtctgacaatggcaaaggtgtcgaagaggcgaactttgaagga
ctggcactaaagcatcacacatcaaagctgagggatttctctgacctgatccacgtggaa
acattcggctttcgaggcgaagccctgagctctttgtgtgctctcagtgacctgagtgtg
attacgtgccatgggtccagccaagtaggcaccaagttggtgtttgaccacaaaggtcac
cttgtgcagcagtccccctgtcccaggcagcagggtaccacggtaacgctgcagcagctc
ttctacacgctgcctgtcagacacaaggagttccagcggaatatcaagaaggagtttgct
aaaatgatccacgtcctgcaggcctactgcatcgtctctacaggagtccgtatcacctgc
tccaaccagacgggccagggaaagcgcagcgccgtcctcagcaccggtggcagccacagt
atgagagatgacatcggagccatatttggaccaaaacagctgcagagtcttctcccgttc
cggcaagtttctccatcagagaatatcatggaggaatatggacttaaagacggagactta
cccaaacagctttttacgatttcaggctttgtgtccaccggggaccacggcgtggggcgg
agcgcctcagaccggcagttcttcttcatcaacagccgcccatgtgacccagtgaaggtc
agtaaacttgtgaatgaagtgtaccacatgtacaacagacatcagtatccatttgttgcc
ctgaacatagctgttgcctcagactgcgtggatgtgaatgtaacgcctgacaaacgacag
attttccttcaagaggagaagctcttactcgccatcctaaagtcttctctcatcaacatg
tatgaagctggagtaaataagatcagcctgaacaatacactgactgtatcgtctgcatct
aaagaagttcaccatcctgttgaagacaaagcagaacctgcggagaccaaccaaccaggg
actccgagcccaaagtcaaccatgaacctcgccgccttcaaagctgctttttcaaaccag
aacagcgccctctctggaagtaggtcaagcacagaaaaagcttccaaaagcgggccgagc
cagaaaacgctgcagtgtttctttaagagttcagttaaatcacccgtacaacccagaaca
gaggcagctaaaggcagctttggagcgcgggcggagtcattctccctgtctgtcaggaag
aatgactctgaaagaggcttggcagtagaatcaccagatccacagcatccagtctcctcc
agaccagttgttaaaaatgtaacgcatgactcatcggtgagccagaacctccctgaggac
ccggagttccaggccgaagcacgttcacctgtcgaggactgcgtcattatccccgaagct
aaaagagccagacgagacgatccatatttcaccgcagagcgaacgcccgacacggcttcc
tccacggccgacgtccccgtctgtctgcagaggaggaccgtgccgctgcatttctgtctg
caggccctggcagccggcatgaagaggctgcagcagcagcagcagagacgacgagccgca
gacaggctgcgctacaggcgcttcagggccaacatcagccccggagaaaaccagagagct
gaggacgagctccgcagagagatcagtaaggacatgtttaaggaaatggagatcatcggt
cagtttaacctgggcttcatcatcaccaagttgaactcagacatctttatgattgaccaa
cacgccaccgatgagaaatacaactttgagatgctgcagcagcacactgtgctccaagga
cagaggctcattgtcccacagaaactccacctgactgcagtcagtgagaacgtgctgtta
gagaacgtcgagatcttccagaagaacggctttgagttcttgatcgatgaagacgcccag
gtgatggagcgagtgaagctggtctccttgcccaccagtaggaactggaccttcgggccg
gccgacattgaagagctgatcttcatgctgagtgacagtcctggcgtcatgtgccgcccg
tccagagtcaggcagatgttcgcttctagagcgtgtcgcaaatcagtgatgatcggtaca
gctctgagtgtcggtgagatgaagaagctggtgattcacatgggagagatcgagcatcca
tggaactgtcctcatggcaggcccaccatgagacacctcgccaacctggaaattatttca
caggactga
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