Poecilia reticulata (guppy): 103482437
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Entry
103482437 CDS
T05149
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04217
Necroptosis
pret04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
103482437
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
103482437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103482437
Enzymes [BR:
pret01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
103482437
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
103482437
Multi subunit type E3
LUBAC complex
103482437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
zf-RING_2
zf-RING_5
IBR_1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
103482437
NCBI-ProteinID:
XP_008436812
LinkDB
All DBs
Position
LG20:10426645..10437554
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AA seq
705 aa
AA seq
DB search
MSLSSGGWTHSPGLTPDQSTALTGSYEASQAQPGYQTVLMSVRVSVCHSGVRPLCLPGAG
DESLRLQLSMDPGKSGEFRLAIQSTSGTGQSVTINEFDLRSINYEVKSPKCHELISVAPP
CDRISFNFSSEQEAEGWATVVMSSLREAHRATPQQNGLQHLFDGLHLRNTSALQQTEDAC
IELKKAIEAGDMQSASVFAASLARRQAALKIQPSTKTYEETEINLAVIVEDSSSSCCITV
KVFPHMTAASLKQQMFLEYGFHPRVQRWVIGQCLCADLRTLASYGVRQDGDTAFLYLLSA
RHSRLTLQVLQKDQENALLLSPPSSFQNPSLPAAFTNCPISHDGRPFSTLPPRLRRTSDN
GGLETLNIGNIGDQINFEMPRLNLNTPSTQGWSCPSCTYINKPTRPGCEICSTNRPESYI
IPGGHQPDALELRRILQEKESIRQYQQAKEQERRENFDRLVKMDGQDLVPNPEPVDCKIC
FVDLQSGEGVLLRECLHCFCKECLRSIIMLCEEPEVSCPYRDDAYACPWALQEREIRALV
PPEEYERWLQRSLSVAESRCEGSYHCATPDCLGWCVYEDTVNVFHCPICRKHNCLICKAI
HEGMNCKQYQDDLAARAINDSAARRTTHLLKTLVQSGEAMHCPQCGIIVQKRDGCDWLRC
TVCHTEICWVTRGPRWGPKGPGDTSGGCRCNVNNQKCHPKCQNCH
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctaagttcaggcggctggactcacagccccggcctcacgccggaccagtccacc
gccctcaccggcagctatgaagcctcgcaggcacagcctggctaccagaccgtcctcatg
tcggttcgggtctcggtgtgccattccggggttcgtccgctgtgtcttccgggagctggt
gatgagtcactccgtctgcaactgagcatggacccggggaaatccggggaattccggctg
gcgatacagagcaccagcgggaccggccagagtgtgaccataaacgaatttgatttaaga
tccataaattacgaagtgaagtcgccaaagtgccacgagctgatatcggtggcgcctccg
tgcgaccgcatcagcttcaacttcagcagcgagcaggaggctgagggatgggccaccgtg
gtcatgtcctcgctgagggaagcacatcgagccacacctcagcaaaacggtctacagcac
ctcttcgacggcctccatctccggaatacctcggctttacagcaaacggaggacgcttgc
atagagctgaaaaaagccatcgaggcaggggacatgcagagcgcttctgtcttcgccgcc
tctctcgcccgcagacaggcagccctgaagatccagccctccaccaaaacctatgaagaa
actgaaataaacttagctgttattgtcgaggattcctcctcgtcttgttgcatcactgtg
aaagttttccctcacatgactgctgcgtcgttgaagcagcagatgtttctcgagtatggc
ttccacccgcgggtccagcgctgggtgatcggccagtgtttgtgcgccgacctccgaacc
ctcgcgtcgtacggcgtccgtcaggatggtgacacggccttcttgtacctcttatcggcc
cgccactctcgcctgaccctccaggttctgcagaaggaccaggagaacgccctccttctc
agccctccgtcgtcttttcaaaacccctcgctccccgctgccttcacaaactgccccatc
tcccacgacgggcggccattttcaactctacctcctagactccgcaggaccagcgataat
ggtggcctagagacactgaacatcggcaacattggagatcagatcaatttcgaaatgcct
cgactcaatctcaacacgccttctacccagggttggtcgtgtccatcttgcacgtacatc
aacaagccgacgcggccgggctgcgagatctgcagcacaaaccggcctgagagctacatt
atccctggaggacaccagccggacgctctggagctcagaaggatcctgcaggagaaggag
tcaatcagacagtatcagcaggcaaaggagcaggagcgaagagagaactttgaccggctc
gtgaagatggacggtcaggacctggtgcccaatcccgagcctgtggattgtaagatctgc
ttcgtggacctgcagtcgggagaaggcgtcctgctgagagagtgtctccactgtttctgc
aaagagtgcttgcgctccatcatcatgctgtgcgaggagcctgaggtttcctgtccgtac
agagacgacgcgtacgcctgtccgtgggccctgcaggaacgagagatccgagccttggtg
cctccggaggaatacgagcgctggctgcagagaagcctttctgtggcagagtctcgctgc
gagggcagctatcactgtgcaactccggattgtctgggatggtgtgtgtacgaggacacc
gtcaatgtcttccactgtcccatctgtcggaaacacaactgcctcatttgcaaggccatc
catgagggaatgaattgtaaacaataccaagacgacctcgcagcccgagcaataaacgac
tctgctgccagaagaacgacacatctgctaaagacccttgtgcagtcaggggaggccatg
cactgtcctcagtgtggcatcattgtgcaaaagagggatggatgtgattggctgcgctgc
accgtctgtcacactgagatctgctgggtaaccagagggcctcgttggggacccaagggt
cctggagacaccagcggaggatgccgctgcaatgtcaacaatcagaaatgtcatcctaaa
tgccaaaactgtcactaa
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