KEGG   Poecilia reticulata (guppy): 103482472
Entry
103482472         CDS       T05149                                 
Symbol
tceb1
Name
(RefSeq) transcription elongation factor B polypeptide 1
  KO
K03872  elongin-C
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pret00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103482472 (tceb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pret04121]
    103482472 (tceb1)
   03400 DNA repair and recombination proteins [BR:pret03400]
    103482472 (tceb1)
Ubiquitin system [BR:pret04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     103482472 (tceb1)
   Cul5 complex
     103482472 (tceb1)
DNA repair and recombination proteins [BR:pret03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     103482472 (tceb1)
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 103482472
NCBI-ProteinID: XP_008436881
UniProt: A0A3P9PDJ2
LinkDB
Position
LG20:complement(9231198..9234996)
AA seq 112 aa
MDGEERTFGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEV
NFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC
NT seq 339 nt   +upstreamnt  +downstreamnt
atggatggtgaggagagaacttttggtggctgtgaagggccagatgccatgtatgtgaag
ctcatctcctcagacggccatgaattcattgtgaaaagagaacatgccttaacatcggga
accatcaaagccatgttaagtgggccaggacagtttgcggagaacgaaaccaacgaggtg
aacttcagggagatcccgtcccacgtcctgtctaaggtctgcatgtatttcacctacaag
gtccgttataccaacagctccacggaaataccagagttccccatcgctcccgagatcgct
ctggaactgctcatggctgcaaattttttggattgttaa

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