KEGG   Poecilia reticulata (guppy): 145553632
Entry
145553632         CDS       T05149                                 
Symbol
col1a2
Name
(RefSeq) collagen alpha-2(I) chain
  KO
K06236  collagen type I alpha
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret04510  Focal adhesion
pret04512  ECM-receptor interaction
pret04518  Integrin signaling
pret04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pret00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    145553632 (col1a2)
   04518 Integrin signaling
    145553632 (col1a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    145553632 (col1a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    145553632 (col1a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pret00536]
    145553632 (col1a2)
Glycosaminoglycan binding proteins [BR:pret00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   145553632 (col1a2)
SSDB
Other DBs
NCBI-GeneID: 145553632
NCBI-ProteinID: XP_081468498
LinkDB
Position
11:complement(11222496..11241385)
AA seq 1351 aa
MLSFVDTRILLLLAVTLYLTSCQSGPRGDKGPRGDRGFPGPNGKDGKPGLPGPPGPPGPP
GLGGNFAAQYDGAKAPDPGPGPPGMMGPRGSPGMPGLQGPQGQTGHSGEPGQPGHDGPLG
ARGPPGPPGKSGEDGNNGRPGKPGDRGAAGPQGARGFPGTPGLPGMKGHRGYTGIDGRKG
EPGSAGAKGESGASGSSGSPGLAGQRGQSGERGRPGPAGPAGARGSDGNSGPAGPAGPLG
AAGPPGFPGGPGPKGELGAAGGTGPSGPQGSRGEPGPNGVVGPIGPPGNPGANGLNGAKG
AAGTPGVAGAPGFPGPRGGPGPQGPQGAAGPRGLSGDSGPQGVKGDTGGKGEPGNAGPQG
PTGTQGEEGKRGPTGEIGANGPAGSRGARGAPGSRGLPGSDGRSGPIGMPGARGATGAAG
PRGPPGDAGRAGEPGPAGLRGLPGSPGSSGPPGKEGPSGPSGQDGRAGPPGPTGPRGQPG
TIGFPGPKGPSGEPGKPGEKGPSGPTGLRGPPGPDGNNGATGPMGVAGGAGEKGEQGPAG
APGFQGLPGPAGPVGEAGKPGERGMPGEQGAAGPGGGKGERGNPGSAGSAGAQGPIGPRG
PAGAPGPDGGKGEPGAAGAAGAAGHQGSAGIPGERGVAGGPGGKGEKGETGHRGPDGNPG
RDGARGPAGPPGPPGPTGANGDKGEVGSFGPAGPAGPRGASGERGEVGPAGAPGFAGPPG
LDGQSGARGERGPGGAKGEAGSAGPAGPAGQSGPAGPSGPAGPTGARGETGPPGLTGLPG
AAGRVGAPGPAGIVGPPGPSGNSGKDGPRGLRGDSGPAGPSGEQGMVGPPGPPGEKGPSG
ESGPAGIAGAPGQTGPLGITGFVGLPGARGDRGTPGGAGAVGEPGRSGPPGSSGARGPPG
NIGMPGMTGPQGEAGREGSPGNDGPPGRPGASGFKGDRGEPGSPGALGLAGAPGPAGPTG
GAGRPGNRGEAGPSGPSGPAGSAGARGVPGPAGPRGEKGVAGDKGDRGMKGLRGHPGLQG
MPGPSGPSGESGPAGALGHAGPRGPSGPNGPPGKDGRAGTHGPMGPPGSRGPPGYVGPVG
PAGSPGLPGPPGPSGGGYDVSGYDEYRADQPALRAKDYEVDATIKSLNTQIDNLLTPEGS
RKNPARTCRDIKLSHPDWSSGFYWIDPNQGCINDAIKVFCDFTTRETCIYAHPESIARKN
WYRSTENRKHVWFGETINGGTEFTYNDETLSPQSMATQLAFMRLLSNQASQNITYHCKNS
IAYMDGESGNLKKAVVLQGSNDVELRAEGNSRFTFSVLEDGCTTHTGEWSKTVIEYRTNK
PTRLPILDIAPLDIGGADQEFGLDIGPVCFK
NT seq 4056 nt   +upstreamnt  +downstreamnt
atgctcagctttgtggatactcggattctgttgctgcttgcagtaacgttatacctaaca
tcatgccaatcaggtcccagaggagacaaaggacctcgaggtgacaggggttttcctggc
cctaatggaaaagatggcaaacccggactccccggcccccccggcccccctggcccccct
ggactcggaggaaactttgctgctcaatatgatggtgccaaagcccccgatcctggaccc
ggacccccaggaatgatgggacccagaggttcccctggaatgcctggactccagggacct
caaggacagactggacactctggtgaacctggacagcctggacacgatggcccccttgga
gcccgtggaccccctggaccacctggcaaatctggagaagatggaaacaatggcagacct
ggcaagcccggagacagaggtgccgccggccctcagggtgctcgtggattcccaggaact
cctggacttccagggatgaagggacacagaggttacactggtattgatggacgtaaggga
gaacccggctctgctggcgccaagggtgagtctggtgcctctggatcttctggaagtcct
ggactggccggacaacgtggtcagtccggtgagagaggccgccccggccctgctggtcct
gctggtgctcgtggttctgatggcaattctggacctgctggcccagctggtcctttgggt
gctgctggccccccaggcttcccaggtggtcctggacccaagggagagctcggtgccgct
ggaggcactggcccatctggacctcagggatctagaggagagcccggacccaacggtgtt
gttggcccaattggtccccctggcaaccctggtgctaatggtctgaatggagccaaggga
gctgctggaacccccggtgttgctggagctcctggtttccccggaccaagaggaggacct
ggacctcagggacctcagggtgctgctggaccaagaggactttctggtgattctggtcct
cagggtgtcaagggagacactggtggcaaaggagagcctggtaacgctggccctcaggga
cctaccggaactcaaggcgaggagggcaagagaggacccactggtgagattggtgctaat
gggcctgctggcagccgtggtgctagaggtgctcccggaagccgtggtctgcctggttcc
gatggaagaagtggcccaattggtatgcctggtgcccgtggtgctactggtgctgctgga
cctcgtggaccccctggagatgccggtcgtgctggcgagcctggccctgccggtctcaga
ggtctcccaggaagccctggaagctctggacccccaggaaaggagggaccttctggtcct
tctggacaagatggccgtgctggacctcccggcccaactggacctagaggccagcccgga
accattggtttccctggacccaaaggaccctctggagagcctggcaaacctggagagaag
ggacccagtggccccaccggactgagaggaccccctggacctgatggcaacaacggagcc
actggccccatgggagttgctggcggtgccggtgagaagggagagcagggaccagctgga
gctcctggcttccagggtctgcctggacctgctggacctgtcggtgaggctggcaagcct
ggagagagaggtatgccaggagagcagggagccgctggaccaggtggtggcaagggagag
cgtggtaacccaggttctgctggatctgctggagctcagggaccaattggaccccgtgga
ccagctggagcccccggacctgatggtggcaagggagagccaggagctgctggagctgct
ggggctgccggacatcaaggatctgctggaatccccggtgagcgtggagtagccggtggt
ccaggaggcaagggcgagaagggagagaccggacacagaggccctgatggaaatcctggc
agagatggcgctcgtggccctgctggacctcctggcccccctggacccactggagccaat
ggtgataagggtgaagttggttcctttggacctgctggccctgctggacctcgtggagcc
tctggtgagcgtggagaggttggacctgccggagcccccggatttgctggacctcctggt
ctcgatggtcagtccggagccagaggagagcgtggacccggcggagctaagggagaggct
ggatctgctggccctgctggacccgctggacagtctggacctgctggcccctctggccct
gctggacctactggtgctcgtggagaaactggccctccaggtctgactggtttgcctggt
gctgctggcagagttggtgctcccggccctgctggtattgtgggacctcctggcccctcc
ggtaactctggcaaagatggacctcgtggtctccgtggcgactctggtcctgctggtcct
tctggtgagcagggaatggttggaccacccggtcctcccggagagaagggaccctccgga
gagtctggccctgctggaattgctggtgctcctggacaaactggacctctgggaattaca
ggattcgttggtctgcctggtgctagaggagatcgtggtacacctggtggtgctggtgct
gtgggagagcctggcagatctggaccccctggttcatctggagcccgtggtccccctggt
aacattggcatgcctggtatgaccggacctcaaggagaggctggacgcgagggtagccct
ggtaacgatggaccccctggtcgtcccggtgcttctggattcaagggagaccgcggtgag
cctggatcccctggtgccttgggacttgctggtgctcccggacctgccggaccaactgga
ggtgctggcagacctggaaaccgtggagaggctggcccatcaggtccttctggacccgct
ggatccgctggagccagaggcgtcccaggacctgctggacctcgtggtgagaagggagtt
gctggagacaagggagacagaggcatgaagggtcttcgtggacatcctggtctccaggga
atgcctggaccttctggaccttctggtgagagcggtcctgctggagcccttggacatgct
ggacccagaggaccttctggacccaatggaccccctggtaaagatggtagagctggcaca
catggtccaatgggtcctcctggttcccgtggacctcctggatatgttggaccagttggc
cctgctggatctcctggtctgcccggacctcctggcccatctggtggcggatacgatgtc
tctggatacgacgaatacagagctgatcagccagctctcagagccaaggactacgaagtc
gatgccaccatcaagtctctcaacacccagattgacaacctgcttacccccgagggatcc
agaaagaacccggcccgcacctgccgcgacatcaagctcagccaccccgactggagcagc
ggattctactggattgaccccaaccagggctgcatcaatgatgctatcaaggtcttctgc
gactttaccacccgcgagacctgcatctatgcccatccagagagcattgcacgcaagaac
tggtacagaagcacagaaaacaggaagcacgtgtggttcggcgagaccatcaacggcggc
accgagttcacctacaacgacgagactctcagcccacagagcatggccacgcagctggct
ttcatgcgcctgctttccaaccaggctagccagaacatcacctaccactgcaagaacagc
attgcctacatggatggtgagagcggcaacctgaagaaggccgttgtgctccagggctcc
aacgatgtggagctcagggccgagggcaacagccgcttcaccttctccgtgctggaggat
ggctgcactacacacactggtgagtggagcaagacagtgattgagtacagaacaaataaa
ccaactcgcctccccatcctcgacattgcacctttggacattggtggagctgatcaggag
tttggtttggacattggcccagtctgtttcaagtaa

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