Candidatus Peribacter riflensis: PeribacterA2_0213
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Entry
PeribacterA2_0213 CDS
T04147
Name
(GenBank) DNA polymerase bacteriophage-type
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
prf
Candidatus Peribacter riflensis
Pathway
prf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PeribacterA2_0213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prf03400
]
PeribacterA2_0213
Enzymes [BR:
prf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PeribacterA2_0213
DNA repair and recombination proteins [BR:
prf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PeribacterA2_0213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALM09607
UniProt:
A0A0S1SK76
LinkDB
All DBs
Position
complement(210518..211156)
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AA seq
212 aa
AA seq
DB search
MAGMELTLPLLQEKLKAWKGCPLHETANPVLGEGNPQAEVMFIGEAPGEQEDKLGRPFVG
PAGKFLDELLMSIGLKRADVYISNVVKYRPPANRDPTDDEKAQCMPWLKMEMALIKPKVI
VPLGRHALGHFFQKLSITAAHGKPQKLTDDVTVFPIYHPAAALHNGNLREALFEDFRALG
LFLETTKKNNELGIKNNELGIKNDEKEVILTS
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggcggggatggaactcaccctcccgctcctgcaggagaaactgaaggcatggaaaggc
tgtccgctgcacgaaacggctaaccccgtgctgggcgaaggcaatccgcaggcggaggtc
atgttcatcggcgaagcgccgggcgaacaggaagacaaactcggacgcccgttcgtggga
cccgcaggcaagttcctcgatgagctcctcatgtcgatcgggctcaagcgtgcagacgtg
tacatcagcaacgtcgtgaagtaccgcccccccgcgaatcgggatcccaccgatgatgag
aaggcgcagtgtatgccgtggctcaagatggagatggctctcatcaaaccgaaggtgatc
gttccgctcggacgccatgccctggggcacttcttccagaagctcagcatcaccgccgcc
cacggcaagccccagaagctgaccgatgacgtcacggtcttccccatctaccaccccgcc
gctgcgctgcataacggaaatctgcgagaggcactgtttgaggatttccgagcgctgggg
ctgtttctcgagacaacgaagaagaataatgaattaggaattaagaataatgaattagga
attaagaatgatgaaaaggaagtcattcttacttcataa
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