Candidatus Peribacter riflensis: PeribacterA2_0234
Help
Entry
PeribacterA2_0234 CDS
T04147
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
prf
Candidatus Peribacter riflensis
Pathway
prf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PeribacterA2_0234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prf03400
]
PeribacterA2_0234
Enzymes [BR:
prf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
PeribacterA2_0234
DNA repair and recombination proteins [BR:
prf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PeribacterA2_0234
Prokaryotic type
PeribacterA2_0234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ALM09626
UniProt:
A0A0S1SS16
LinkDB
All DBs
Position
225928..226896
Genome browser
AA seq
322 aa
AA seq
DB search
MRRSERISAFAETMWDWYLVHKRRLPWRDLRTADASERACRILVSEVMLQQTQVERVKEI
YIRFLKEFPTLHALASASSRAVIIAWRGMGYNSRALRLRDAARKIVEECGGIFPDSLEAL
ESIKGIGHYTAAAIRNFAFNLPTPCIDTNIRRILHRTFVGPERPDGTWKKDDRYLLKIAE
ETLDAAMDGGRDHDARNWHAALMDFGSLVQTKKNPRWDLCPLTAKGIMKATSANFPKSEV
RSPKSEPGRKIASRFVPNRIMRGRIVGALRDAPSGITLDALGRCVAADWSHAQHRQWLQG
LLRKLEQEKLVARRGAAYVLHG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgatcagagcgcatttcggccttcgcagagacgatgtgggattggtatctcgtc
cacaagaggcgccttccctggcgcgacctccgcacagcagacgcgagcgaacgggcgtgc
cgcattcttgtttccgaagtcatgctccagcagacacaggtggagcgggtgaaggagatc
tatatccgcttcctgaaggaatttccaacgctgcatgctcttgcgagcgcgtcgagtcgc
gcagtgattatcgcgtggcgcggcatgggctataacagccgcgcgcttcggctccgtgat
gccgcacggaagattgtggaggagtgcggtggcatttttccagacagtctcgaggcattg
gaatcgatcaaaggcatcggacactacacggctgctgccatccgaaacttcgccttcaat
ctgcccacgccgtgtatcgacacgaacatccgccgcatcctgcaccgcacgttcgtgggg
cccgaaaggccggatgggacctggaaaaaagatgatcgatatctgttgaaaattgcagaa
gagacattggatgcagccatggatggagggcgcgatcacgatgcgcgaaattggcatgcg
gcattgatggactttggctccctcgtgcagacgaagaagaatcctcggtgggacctttgt
ccgctcacggcgaagggaatcatgaaagccaccagtgcgaatttcccgaagtccgaggtc
cgaagtccgaaatccgagcctggtcgcaagatcgccagccgcttcgtcccgaaccggatc
atgcgtggcaggattgtcggagccctgcgcgacgcaccgtcgggcattacgctcgacgca
ctcggcaggtgcgtggcggccgattggtcccatgcacagcaccgtcagtggctgcagggg
ctgctccgaaagctggaacaggagaaactggtcgcccgacggggggcggcctacgttctc
cacggatga
DBGET
integrated database retrieval system
