Candidatus Peribacter riflensis: PeribacterA2_0285
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Entry
PeribacterA2_0285 CDS
T04147
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
prf
Candidatus Peribacter riflensis
Brite
KEGG Orthology (KO) [BR:
prf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prf03032
]
PeribacterA2_0285
03400 DNA repair and recombination proteins [BR:
prf03400
]
PeribacterA2_0285
Enzymes [BR:
prf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PeribacterA2_0285
DNA replication proteins [BR:
prf03032
]
Prokaryotic type
DNA Topoisomerases
PeribacterA2_0285
DNA repair and recombination proteins [BR:
prf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PeribacterA2_0285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ALM09677
UniProt:
A0A0S1SLM2
LinkDB
All DBs
Position
295354..297396
Genome browser
AA seq
680 aa
AA seq
DB search
MASAKQQYTAENIQVLEGLEPVRKRPGMYIGSTDQRGLHHLVYEIVDNAIDEAMGGHASL
IIVTLHDDGSVSVYDNGRGIPVDIHPKIKKSALEIVLTTLHAGGKFGGDDSGYKVSGGLH
GVGSSVVNALSVKMRAEIYRDGKVWVQEYERGKPQADVKSKGETKKRGTLIRFWPDKQIF
DTLEFSLVTIMNRLRQQAYLTRGITVALLDEREKRSEEDQKQPRLYRFHFEGGIAAYVSH
LNASRDVIGKPIWFEKDTPEGFVEVALQYTQSFQEMVATFANNIHTTEGGHHLTGFKAAI
TRTINAYARSQSLLKEKDENLSADDVREGLTAIVSVRLKEPQFEGQTKSKLGNAEMKTAV
ETVVNDKLAEYFEEHPGEAKDIVAKCTLAARARLAARAARDSVIRKGALEGMTLPGKLAD
CSSRDPSECELFIVEGDSAGGSAKQGRNREFQAILPLRGKILNVEQARLDKMLANNEIKA
LIIALGVGVGEVKDLSRLRYHRVVIMTDADVDGAHIRTLLLTLFFRYFPELIEAGFIYIA
QPPLFKIQHGKDISYAYNEEEKEKTLKKWGVDVNAIEEAEETEGTEETAEMKALMKEGKG
KKEEKKSPRVNIQRYKGLGEMNPEQLWDTTMNPDSRSMMRVTMDDAELADATFSTLMGSE
VAPRRKFIQTRAKTVKNLDI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcaaaacagcagtacaccgcagagaatatccaggttttggaaggcctggag
cccgtccgcaagcgtccaggcatgtatatcggctccacggatcagcgtgggctccatcac
ctggtctacgagatcgtggataacgcgatcgacgaggccatgggcggccatgcctccctg
atcatcgtcacgttgcacgatgacgggtccgtgagtgtgtatgataacggccgcggcatc
ccggtggatatccaccccaagatcaagaaatccgcgctcgagatcgtactcacaacgctc
catgccggaggcaaattcggcggcgacgatagcggctacaaagtctcgggcgggctgcat
ggcgtgggttcctccgtcgtgaacgccctgagcgtcaagatgcgggccgagatctaccgc
gacggcaaggtctgggtgcaggagtacgagcgcggcaagccccaggcggatgtgaagtca
aagggcgagacgaagaagcgcggcaccctcatccggttctggcccgacaagcagattttc
gacacgctcgagttctcgctcgtgacgatcatgaaccgcctgcgccagcaggcgtacctc
acccggggcatcaccgtggcgctcctcgatgagcgcgagaagcggtcggaggaggatcag
aagcagccgcgcctgtaccggttccacttcgaggggggcattgctgcgtacgtgtcgcac
ttaaacgcgtcacgcgacgtgatcggcaagccgatctggtttgagaaagacacgcccgag
ggcttcgtcgaggtggcgctgcagtacacgcagtcctttcaggagatggtggcgacgttc
gccaacaacatccataccacggagggcggccatcacctcacggggttcaaggcggccatc
acgcgcaccatcaacgcctatgcgcgttcccagagtctcctgaaagagaaagacgagaac
ctctcggccgatgacgtgcgcgagggtctcacggccatcgtgtcggtgcgcctcaaagag
ccgcagttcgaagggcagacgaaatccaagctcggcaacgccgagatgaaaaccgccgtg
gagaccgtggtgaatgacaagcttgccgaatacttcgaggagcatccgggcgaagccaaa
gacattgtcgccaagtgcaccctcgccgcccgcgcccgcctcgccgcccgcgccgcccgc
gattccgtgatccgcaagggcgcgctggagggtatgacgctgccgggaaaactggccgac
tgctccagccgcgatcccagcgaatgcgagctcttcatcgtcgagggtgattctgcagga
ggctcggccaagcagggccgcaaccgcgagttccaggccatccttccgctccgcggcaag
atcctcaatgtcgaacaggcgcggctggataagatgttggccaataacgagatcaaagcg
ctcatcatcgcgctcggggtcggcgtgggcgaggtgaaggatttgagcagactccgctac
caccgcgtggtgatcatgaccgatgccgacgtggacggagcgcacatccgcacccttctt
ttgaccctcttcttccgctacttcccggaactcatcgaggccgggttcatctacatcgcc
cagccgccgctcttcaagatccagcacggcaaggacatctcctacgcgtacaacgaggag
gagaaagagaagactctgaagaagtggggtgtcgatgtgaatgcgatcgaggaggccgaa
gagaccgaaggaacagaggagaccgcagagatgaaggctctcatgaaggagggcaagggc
aagaaagaagagaagaaatccccgcgcgtgaatatccagcggtacaagggcttgggcgaa
atgaaccccgaacaactgtgggataccaccatgaatcccgacagccgcagcatgatgcgg
gtcaccatggacgatgccgagctggccgatgccaccttctccaccctcatggggtccgag
gtcgcgccccgaagaaagtttattcaaacgagagcgaagacggtgaagaacctggatatt
tag
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