Candidatus Peribacter riflensis: PeribacterA2_0351
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Entry
PeribacterA2_0351 CDS
T04147
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
prf
Candidatus Peribacter riflensis
Pathway
prf03030
DNA replication
prf03430
Mismatch repair
prf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PeribacterA2_0351
03430 Mismatch repair
PeribacterA2_0351
03440 Homologous recombination
PeribacterA2_0351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prf03032
]
PeribacterA2_0351
03400 DNA repair and recombination proteins [BR:
prf03400
]
PeribacterA2_0351
Enzymes [BR:
prf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PeribacterA2_0351
DNA replication proteins [BR:
prf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PeribacterA2_0351
DNA repair and recombination proteins [BR:
prf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PeribacterA2_0351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
SMC_ScpB
Motif
Other DBs
NCBI-ProteinID:
ALM09742
UniProt:
A0A0S1SVK2
LinkDB
All DBs
Position
378874..379878
Genome browser
AA seq
334 aa
AA seq
DB search
MENVFLFTGENEFTLRQELLRWIREFREKHGEENLSRLSAAGLAPSAFLNEVAAAPFIAE
RRLVVVDGIPSFAAEEGSAGKRKGAKGSLGMQAVLHEVHPQVIVLFVAPKPDRRLATTKE
LLECATVRTFAPLQGDALLRWMQEEFRQRGTAAGPEVQTLLLSLVGEDQQVLSQEIEKLS
LAAGGQPLTRAHIDALVLPSAEQTIWHLLDLLGEGHPGEAVAYCRQLMRRGESAQGIWAI
FLWIVTSFAAVTAAVQEGTTSIQGIMEATGVKFGAARSLLPLARTCRREALCDLLNRVTE
ADIRLKTGVFKSGGDSEEELAALLDRCLLSFPTR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgtcttcctcttcacgggcgaaaacgaattcacactccgccaggagcttctg
cgctggatacgggagtttcgcgagaagcacggggaggagaatctttcgcgcctctcggct
gcaggtctcgcgccttcggcattcctcaacgaagtcgcggcggcacccttcattgcggag
cggcgcttggtggtggtggatggtattccctcattcgcggccgaggagggttctgcgggc
aagcggaaaggggcgaaagggtcgctgggtatgcaggcggtgctgcacgaggtgcatcca
caggtcatcgtgctcttcgtcgcgcccaagccggaccgccgtctcgctacgaccaaagag
ctgctcgaatgtgcgaccgtacggaccttcgctcccctgcagggggatgcgctcctgcgc
tggatgcaggaggagttccgtcagcgggggactgccgcagggccggaggtgcagacactt
ctcctctcgctggtcggagaggatcagcaggtgctctcacaggagatcgagaaactctca
ctcgcagcgggcggtcaaccgctgaccagggctcacatcgatgctcttgtcctgccttcc
gccgagcagacgatctggcatctgctagatctcttgggcgaggggcatccgggtgaggcg
gtcgcgtactgtcggcagctcatgcgtcggggtgagagtgcacagggaatctgggcgatc
tttctctggattgtcacgagcttcgccgcggtgacggctgcggtgcaggagggcaccacg
agtattcagggcatcatggaggcgacgggggtgaagttcggcgcggcacgatcactcctc
ccccttgcccgcacgtgccggcgcgaggcgctctgcgatctcctcaaccgcgtcaccgag
gcggatatccgcctgaagaccggagtcttcaaatctgggggggactctgaagaggagctg
gccgcactcctcgaccgttgcctgctcagctttcccacgcggtga
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