Candidatus Peribacter riflensis: PeribacterA2_0403
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Entry
PeribacterA2_0403 CDS
T04147
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
prf
Candidatus Peribacter riflensis
Pathway
prf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PeribacterA2_0403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prf03400
]
PeribacterA2_0403
Enzymes [BR:
prf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
PeribacterA2_0403
DNA repair and recombination proteins [BR:
prf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PeribacterA2_0403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ALM09789
UniProt:
A0A0S1SKA5
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All DBs
Position
complement(431021..431854)
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AA seq
277 aa
AA seq
DB search
MALSLHFAVAGTPHSTPAPGGTVEGLKQAKRLGLTAMEIEWVQNVPKNPERMAEIRETAE
ELEITLTVHAPYFVNLNSPDRAKLAASKRRVLDALAMAELCGARSVCVHAAFNLGLPPEK
VYDNVRRATDDIMKHKRSLFPHVNLAYETMGKQTQFGTLEEVLKVSKEFGNYPCIDPAHM
HARENGKINSAEEWNDMFDLYATHLGTGALRHVHMHFSGIAYSTKGERKHLPLTQSDAKW
KDFLSVLKKRKVEGVVVCESPLLEKDTLLMQKTYERI
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggccctttccttgcactttgccgttgccggcaccccccactccactcccgctcccggc
ggaaccgtcgagggtctcaagcaggcgaagaggcttgggctcactgcgatggagatcgag
tgggtgcagaacgtgcccaaaaacccggaacgcatggccgagatccgcgaaacggcggag
gagcttgagatcacactcaccgtccacgcaccctacttcgtgaatctcaattctcccgac
cgcgcgaagctggctgcgagcaagcgcagagtgctcgatgccctcgccatggccgagctc
tgcggagcccggtccgtgtgcgtgcacgccgcgttcaatctggggctgcctcctgaaaag
gtctacgacaacgtgcggcgcgccacggatgacatcatgaagcacaaacgctctctcttt
ccgcacgtcaatctggcctacgagaccatgggcaagcaaacgcagttcggaacgctggag
gaggtgctcaaagtcagtaaggaattcggcaactacccctgtatcgatccggcgcacatg
cacgcgcgcgagaatggcaagatcaattcagcggaagaatggaacgacatgttcgacctc
tacgccacgcacctgggaacaggtgctctgagacacgtacacatgcacttctcgggcatc
gcctactcaaccaaaggcgagcgcaaacacctgccgctcacgcagagcgacgcaaagtgg
aaggactttctgagcgtgctcaagaaaagaaaggtggagggtgtggtcgtgtgcgaatcc
ccgttattggagaaggacacgttgctgatgcagaagacgtatgaacgtatatga
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