Candidatus Peribacter riflensis: PeribacterA2_0592
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Entry
PeribacterA2_0592 CDS
T04147
Name
(GenBank) tRNA pseudouridine55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
prf
Candidatus Peribacter riflensis
Brite
KEGG Orthology (KO) [BR:
prf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prf03016
]
PeribacterA2_0592
Enzymes [BR:
prf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PeribacterA2_0592
Transfer RNA biogenesis [BR:
prf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PeribacterA2_0592
Prokaryotic type
PeribacterA2_0592
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
TruB_C
DKCLD
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ALM09967
UniProt:
A0A0S1SJX8
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All DBs
Position
complement(636486..637346)
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AA seq
286 aa
AA seq
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MRHGFLLIDKPIGPSSHDAVAQVRAVLKEQKIGHLGTLDPAAEGLLVLAVGAKALKVVEL
FSDLPKEYRAHIHFGATSTTYDREGVIERWSPVAGWHAPDEITIRSIIGSRFLGKIQQVP
PAHSAVKIGGERAYRKARQGRGVNIPPREVEITECIIERYAYPHLHLKVACGSGTYIRSL
AHDLGQVLQCGGYLEGLKRISVGEWSVEDAIKPGMAMWTKVIPLKDVLAAFPKLELTDAQ
AEDIKHGRSIAHETAPDTIGWNEGLPIAVLIPCRDGTRQSRARKVL
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcgccatggttttctgctcatcgacaagcccattggtccctccagccatgacgccgtg
gcgcaggtgcgcgcggtgctcaaagagcagaagatcgggcatctgggcacgctcgatccg
gcggcggaggggcttttggtgctcgcggtgggggcgaaggcgctcaaggtggtggagctt
ttttccgatctgcccaaagagtaccgcgcacacatccatttcggcgccacgagtacgacg
tacgatcgcgagggcgtgatcgagcggtggtcgccggttgcgggctggcatgctcccgat
gagatcacgattcgttcgatcatcggcagtcgcttcctcggcaagatccagcaggtgccc
cccgcgcactccgcggtgaagatcggcggcgagcgcgcgtaccgcaaggcgcgtcagggc
aggggagtgaacatccctccccgcgaggtcgagatcaccgagtgcatcatcgagcggtac
gcgtacccgcacctgcacctcaaagtagcctgcggctcgggtacctacatccgctcgctt
gcgcacgatctcgggcaggtcctgcagtgcggcggctacctggaggggctcaagcgcatc
agcgtgggggagtggtcggtggaggatgccataaagcccgggatggcgatgtggacgaag
gtcattcctttaaaggatgtgctcgcggcgttcccgaaactcgaactcaccgatgcgcag
gcggaggatatcaagcacgggcgttccatcgcacacgagaccgcgcccgataccatcggc
tggaacgaggggctacccattgcggtgctgatcccgtgcagggacgggacgaggcagtca
cgggcgaggaaggtgctgtga
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