Candidatus Peribacter riflensis: PeribacterA2_0707
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Entry
PeribacterA2_0707 CDS
T04147
Name
(GenBank) putative DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
prf
Candidatus Peribacter riflensis
Pathway
prf03030
DNA replication
prf03430
Mismatch repair
prf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PeribacterA2_0707
03430 Mismatch repair
PeribacterA2_0707
03440 Homologous recombination
PeribacterA2_0707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prf03032
]
PeribacterA2_0707
03400 DNA repair and recombination proteins [BR:
prf03400
]
PeribacterA2_0707
Enzymes [BR:
prf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PeribacterA2_0707
DNA replication proteins [BR:
prf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PeribacterA2_0707
DNA repair and recombination proteins [BR:
prf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PeribacterA2_0707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_5
AAA_30
AAA_22
RuvB_N
DnaX_C
AAA_14
SLFN-g3_helicase
AAA_16
RCF1-5-like_lid
DUF815
Zeta_toxin
AAA_19
Mg_chelatase
Torsin
AAA_2
nSTAND3
AAA_24
VapE-like_dom
AAA_18
AAA_28
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ALM10074
UniProt:
A0A0S1SBZ1
LinkDB
All DBs
Position
744565..746031
Genome browser
AA seq
488 aa
AA seq
DB search
MALYRTYRPLAFVDVVGQDHIVTTLEQAVMQDKLSHAYLFAGSRGTGKTSVARILAKHIM
THGIPDGPLKQQIIKGIEEGSLVDLLEIDAASNRSIDDVRDLIEKIQFSPVVAAAKVYII
DEAHMLTKDAFNALLKTLEEPPEYAHFILATTELHKIPSTIQSRCQTFPFRPIEEEDIVR
RLQYIADQEHITVDREALRLVARHVEGGLRDAISLLDQMRSLPKITVQDVEQRIGVSGHE
HIERVVDAIQRNDPPALLDAVQALEEAGVPLDLFLRSLLTLIRSELHHAIAEKKPITEHM
HALDILLEAVRDLRLAPVPGLVVEAALLALCAPAGKERGRAEILPAKAAEKVEKKKSKEE
ETAAAQAPKKEEESALSGAEIEAPEVTLETMTASWEQIVEETAPASVRMSLKNGELQTVA
GLKVTVGFTSAFHRDKVAATDASRTVEEIMHKIFRRSLKLECVLEKDREKDGTKENVVNL
ADAAAEVF
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggctctctaccgaacgtatcggccactcgccttcgtggatgtcgtgggacaggaccac
atcgtgacgaccctcgagcaggccgtgatgcaagacaaactctcgcatgcctacctcttt
gcagggagccgcggcacaggcaagacttcggtggcgcgcatcctcgccaagcacatcatg
acgcacggcattcccgatgggccgctcaagcagcagatcatcaagggtatcgaggaaggg
tctctcgtggatctgctcgagatcgacgcggcgtcgaaccgcagcatcgatgacgtgcgt
gatctgatcgagaaaatccagttctcccctgtcgtcgccgccgcaaaggtctacatcatc
gacgaggcgcacatgctcaccaaagacgcattcaatgcgctcctgaagacccttgaggaa
ccgccggagtatgcgcacttcatcctcgccacgacggagctgcacaagatcccctcgacc
atccagagccgctgccagaccttccccttccgccccatcgaagaggaggacatcgtccgg
cggctgcagtacatcgccgatcaggaacacatcaccgtagaccgcgaagccctgcggctg
gttgcccggcacgtggaagggggcttaagggacgcgatctcgctcttagaccagatgcgc
tccctccccaagatcactgtgcaggatgtggagcagcgcatcggtgtctccggccacgaa
cacatcgagcgcgtcgtcgatgcgattcagcgcaatgatccgccggcgcttctcgatgcc
gtccaggcgctggaggaagccggcgttccgctcgatctcttcctccgctccctgctcacc
ctcatccgctcggagctgcatcacgccatcgcggagaaaaagccgatcacagagcacatg
cacgcgctcgatatcctgctggaagccgtgcgtgacctgcggctggcacccgttccgggg
ctcgtggtcgaagccgccctcctcgcgctctgcgctccagcaggaaaggaacgcggcagg
gcagagatcctgccggcgaaagcagcggagaaggtggagaagaaaaaatccaaagaagaa
gagactgcagcagcccaagcccccaagaaagaggaggaatcggctctgtctggggcggag
atcgaggcgccggaagtcacactcgaaaccatgacggcctcgtgggagcagattgtggaa
gaaacagcgcccgcatcggtgcgcatgtcgctcaagaacggtgaattgcagaccgtcgcg
gggctgaaagtcaccgtaggattcacctcggcattccaccgcgacaaagtggcggccacc
gacgcgagccgcaccgtcgaagaaatcatgcataagatcttcaggcgatcactgaaactg
gaatgcgtgctcgagaaggaccgtgagaaggacggcacgaaggagaacgtcgtgaatctc
gccgacgcggcagcggaagtcttttag
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