Candidatus Peribacter riflensis: PeribacterA2_0715
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Entry
PeribacterA2_0715 CDS
T04147
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
prf
Candidatus Peribacter riflensis
Brite
KEGG Orthology (KO) [BR:
prf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prf03032
]
PeribacterA2_0715
03400 DNA repair and recombination proteins [BR:
prf03400
]
PeribacterA2_0715
Enzymes [BR:
prf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PeribacterA2_0715
DNA replication proteins [BR:
prf03032
]
Prokaryotic type
DNA Topoisomerases
PeribacterA2_0715
DNA repair and recombination proteins [BR:
prf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PeribacterA2_0715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ALM10082
UniProt:
A0A0S1SC02
LinkDB
All DBs
Position
complement(757329..760004)
Genome browser
AA seq
891 aa
AA seq
DB search
MPKKSDKPAEPEKNEKKDKGEQPTPETPSAAPANGLPVQTSLSNIGKIVPRPIVQEMETS
YLDYAMSVIVSRALPDVRDGLKPVHRRILYAMNELGLKSTAKFRKCALVVGDVLGKYHPH
GDSAVYEALVRMAQDFSMRYPIIHGQGNFGSIDGDGAAAMRYTEAKMAKIADELLQDIDK
QTVEFMGNYDSTRKEPRVMPAKIPHLLLNGTVGIAVGMATNIPPHNMGEIIDATLHLMDH
PDATVEELLEFVQGPDFPTGGIVYNREAIKQAYLTGRGSIIVRAKAQIEEIKGRYVIRVS
EIPYQVNKSTMIEKMAHLVQDKAIDGISDIRDESDRTGIRIIVELKKDSYPQKVLNQLFK
HTDLQTSFGYNMIALDGGLQPRLLNLEEALTLFLAHRREVVRRRVTFDRDRARDRAHILE
GLSLALNDIDKVIALIKKSETKEIAKENLVKKFKLSEIQADAILQMRLQTLAGLERKKIE
EELAEKRKFIAECEAILKDPKKIDKIIKTELVEIKETYGDPRRTTIVKHDVGEFSAKDTI
PNAPMIVTLTQTGYVKRLSPMQFRAQQRGGKGVKGMTTKEEDEVLSLLHVMNHDDLLFFT
NTGRVFKLPTYELPQGSRVAKGQAIVNLLQLQPEERVTAILRADMQGKKFLFMVTRGGTV
KRTELTEFENIRRSGLIAQKMPAGDELRWVVETDGKNEIILLTQKGKAIRFKEDDVRPMG
RAAAGVRGIKLSTGDKVVEAAAILDPKKSKLLVVMENGLGKMTPVEQYRFQGRGGTGVKA
AQLTAKTGDIVGGCVLEEGAEGDLLCLSKQGQAIRMQLSDIPSLGRATQGVIIMRLNGKD
KVATVSVVMYDKEAEEAVLEAAEEQRTEEVEAIEKEERRVKRAAKAAQSEK
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagaaatccgacaaacccgcagagcccgagaagaatgagaagaaggacaagggc
gaacaaccgacacccgaaacaccttcggccgctccggcgaacgggcttcctgtacagacc
agtctttccaatatcggaaagatcgttccgcgtcccatcgtgcaggaaatggagacgagc
tacctcgattacgcgatgagtgtcattgtctcacgcgcgcttcctgatgtgcgggacggc
ttgaagccggtgcaccgccgtattctctatgcgatgaacgaacttgggctcaagtcgacg
gccaagttccgcaagtgcgcactcgtcgtcggagatgttcttggtaagtaccacccgcac
ggcgacagcgccgtgtacgaggcgctcgtgcgcatggcgcaggatttctcgatgcggtat
cccatcatccacgggcaggggaacttcggctcgatcgacggtgacggtgccgcagccatg
cgctacaccgaggcgaagatggccaagatcgccgacgagctcctgcaggatatcgacaag
cagaccgtggagttcatgggcaactacgattccacgcgcaaggagcccagggtcatgcct
gccaagattccgcatctgcttctcaacggtaccgtgggcatcgctgtgggcatggccacg
aatatcccgccccacaacatgggcgagatcatcgatgccacgctgcacctgatggatcat
ccggatgccacggtggaggaacttctggagttcgtgcagggtcccgattttccgacgggc
ggcattgtctacaaccgcgaggcgatcaagcaggcgtacctgacggggcgcggctccatc
atcgtgcgcgccaaggcccagattgaagaaataaaggggcgctacgtcatccgcgtctcc
gaaattccctaccaggtgaacaagtccacgatgatcgagaagatggcacatctggtgcag
gacaaagccatcgacggcatctccgatatccgcgacgaatcggaccgtacgggcatccgc
atcatcgtggagctcaagaaagacagttatccccagaaggttctgaatcagctcttcaag
cacaccgatctgcagacgagcttcggctacaacatgatcgccctcgatgggggattgcag
ccgcggctgctcaatttggaagaggcgctcacgctcttcctcgcgcatcgccgcgaggtg
gtgcgacggcgcgtgacgttcgaccgtgaccgggccagggatcgtgcacacatcctcgaa
gggttgagtctggccctgaacgacatcgacaaggtcatcgcgctcatcaagaagagcgaa
accaaggagatcgccaaagagaatctggtgaagaaattcaagctctccgagatccaggcc
gacgccattctgcagatgcgccttcagacgctggcgggattggaaaggaagaagatcgaa
gaagagctcgccgagaagagaaagttcatcgccgaatgcgaggcgattctcaaggatccc
aagaagatcgacaaaatcatcaagacagaactcgtcgagatcaaagagacctatggtgac
ccgcgccgcacgacgatcgtgaagcatgacgtgggcgagttctcggccaaagacacgatt
ccgaatgcgccgatgatcgttacgctcacacagacgggctacgtgaagaggctcagcccc
atgcagttccgtgcccagcagcgcggaggcaagggcgtgaagggcatgacgaccaaggag
gaagacgaggtgctctcgctcctccatgtgatgaaccacgacgatctgctcttcttcacg
aacacgggacgcgtgttcaagctgccgacgtacgagctcccgcaggggagcagagtggcc
aaggggcaggcgatcgtgaacctgcttcagttgcagccggaggagcgcgtgacggcgatc
ctgcgtgccgacatgcagggcaagaagttcctcttcatggtcacacgcggcggcaccgtg
aagcgcacggagctcacagaattcgagaacatccggcgttccggcctgatcgcgcagaag
atgcctgcgggtgatgaattgcgatgggtggtcgagaccgacggcaagaacgagatcatc
ctgctcacgcagaagggcaaggccatccgcttcaaagaggatgacgtgcgtcccatgggc
cgtgcggcggccggcgtgcgtggcatcaagctcagtaccggtgacaaggtggtggaggct
gcggcgattctggatccgaagaaatcaaagctcctcgtagtgatggagaacggactcggc
aagatgaccccggtggagcagtaccgcttccagggtcgcggaggaacgggggtgaaggcc
gcgcagctcacggccaagacaggcgatatcgtgggcgggtgcgtgctcgaggagggtgcg
gaaggggatctgttgtgtctcagcaagcaggggcaggccattcgcatgcagctctcggat
atcccatcgctcggacgcgccacgcagggtgtgatcatcatgcgcttaaacgggaaggac
aaagtcgcgacggtgagcgtggtgatgtacgacaaggaggcggaggaggcggtgctcgag
gctgccgaggagcagcgtaccgaagaggtggaagcgatcgagaaggaggagagacgggtg
aagcgtgcggcgaaagcggcgcagagcgaaaaatga
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