Candidatus Peribacter riflensis: PeribacterA2_0909
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Entry
PeribacterA2_0909 CDS
T04147
Name
(GenBank) 1A family penicillin-binding protein
Organism
prf
Candidatus Peribacter riflensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Big_7
Big_13
Big_3_3
fn3_3
PKD
DUF6286
Motif
Other DBs
NCBI-ProteinID:
ALM10270
UniProt:
A0A0S1ST12
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All DBs
Position
complement(956434..959598)
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AA seq
1054 aa
AA seq
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MVPEFELRPLSNGRTGYRPSARRAPSAVGGGFFGFLQRFLRSLVRVFLPSSGTEKRLKKF
LLRFGVFLVAAGTLYLGFLWFTLPDISDPRSLFAPQSTVITDRNDVELYRLFNEQDRTFV
PSAQIPETMKKAIIAIEDQRFYDRGCLDVRAIARAVFLFGQAGGGSTLTRQLARNALDLK
RENIVSRKFKEVILGCQLESKFSKDELLELYLNWIPFGQNAYGIEQASSTYFARSASGIT
LAQSAVLAALPQRPSYFNPYGSHVRTKVSDEITREVLRGEITSAADISEEEVTVGLLGAV
IGTGATTVYIGGRADAVLRNMQEQELITEQQRLQALDELETLTFQPMRDTIRAPHFVLWV
RQQVEQLLGGQSEKDILERGGLKITTTLDWRLQEIAEKVVANHREDVLDRFGAHNIALVA
LDPATRDVMAYVGNSDYSDELYGGKIDMVQAPRQPGSSFKPIVYAAAFQQGYTPATVLYD
VTTRIGDDQPQDFDGKTMGPMTIRQALGASRNIPAAKAFFLAGGEQPILELARDLGAPTP
LEQRRTLQTTGSGSFEYGWPLALGAAETPLLEMVQAYASLADSGMYKPVVSILKVEDRKG
ALLFAAEPGKEERQVLDPRIAYQITSVLSDASVRPTEYWQSQLTVSGYEAAAKTGTSNKC
LEWKDKNTCKLRKPDNAWVLGYTPNLVAGVWSGNADSSSMYDKGDGLNTSSPLWKEFMER
AHRVLTAPKTAFTPPSGIIQPQISTLSGELPSPCTPIQYRRPDIFLEERPPTLQDPACAQ
LIVDRVTHLLASDACPQAAQESGSFLVAKSILPDRWPTWEEGVQKWVGEQMTLWYASSDH
SGSILPLPVAPTEKCDPALTPGRLDKPTLTILSPDENGSVTYPAFRPKLQYRVGSAVREI
RFEIDGKRVAVRTAAPFDEPLRVPRSVDREESHTLTVTVTDEYYNAVTETVRFHFGEGEG
AGLSVSFLEPEGDTTIAQGETLSMNVQVQDDDGVLKYVQFYLDETLLTTKPREPFSLTYG
VTVSPGTYRLRAVATDLSGKTTDDTVTVTVTEKR
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggttcctgagtttgagctccggccgctttcgaatggacggacggggtaccgtccttct
gcgcgccgtgcgccctctgccgtcggcggaggtttcttcggtttccttcagcgctttctc
cgcagtcttgtgcgcgtctttctgccgtcttcgggtaccgaaaagcgcctgaaaaagttc
ctgctgcggtttggcgtgttcctcgttgcggcaggcacactctacctcggctttctctgg
ttcacgctgcctgacatcagcgatccccgaagtctcttcgctccccagagcacggtgatc
actgaccgcaacgatgtggagctctatcgtctcttcaatgagcaggaccgcacgttcgtc
cccagtgcccagattccggagacgatgaaaaaagccatcattgcgattgaagatcagcgt
ttctatgaccgcggatgcctcgatgtccgtgcaatcgcacgtgcagtttttctgttcgga
caggcgggcggcggctccaccctcacgcgccagcttgcgcgcaacgcgctcgatctcaag
cgcgagaacatcgtcagccgtaagttcaaagaggtgattctgggctgtcagttggaatcc
aaattcagcaaagatgaactgctcgagctctacctcaactggattcctttcggccagaac
gcctacggcatcgagcaggcgagtagcacgtacttcgcccgttccgcttcggggatcacg
ctggcacagtcggccgtcctcgctgcgctcccgcagcgtccctcctacttcaacccgtac
gggtcgcatgtccgcacgaaggtttctgatgagatcacgcgtgaggtcctgcggggtgag
atcacctctgcagccgatatttccgaggaagaggtgaccgtgggtctgctcggcgcggtc
attggaaccggagccacgaccgtgtacatcggcggacgtgcggatgccgtgctccggaat
atgcaggagcaggagctcatcaccgagcagcagcgtctgcaggcgctcgacgagctggaa
acgctcacgttccagccgatgcgcgacaccattcgtgccccgcatttcgtgctctgggtg
cgtcaacaggtggagcaactgctgggcgggcaatctgagaaagatattctcgagcgcgga
gggctcaagatcaccacgacactcgactggcggctgcaggaaatcgcggagaaggtggtc
gccaaccatcgcgaggatgtgctcgaccgcttcggcgcacacaacatcgcgctcgtcgcc
ctcgatccggccacccgcgatgtgatggcatacgtcggcaacagcgattacagcgacgag
ctctatggcggaaaaatcgatatggtgcaggctccgcgtcagcccggatcgagcttcaag
ccgatcgtgtacgccgcggcttttcagcaggggtacaccccggcgacggttctctacgac
gtcaccacgagaatcggcgacgatcagccgcaggatttcgacggcaagacgatggggccg
atgacgatccgccaggcgctgggggcctcgcgcaatattcccgcagccaaggccttcttc
ctcgcggggggcgagcaaccgattctcgaactggcacgtgatctgggcgcacccacgccg
ctggagcagcgccgcacactccagaccaccggctccgggagtttcgagtacggatggccg
ctcgcgctgggcgccgctgaaacgccgcttctggagatggtgcaggcgtacgcatcgctc
gctgacagcggcatgtacaagcctgtggtgagcattctcaaagtcgaagatcgcaaaggg
gcattactctttgcggctgagcctggcaaagaggagcgacaggtgctcgatccgcgcatt
gcgtaccagatcacgtcggtgctcagcgatgcctcggtgcgtcccacggagtactggcag
tcgcagctcacggtctcgggttacgaggctgctgcgaagaccggcacgagcaacaagtgt
ctggaatggaaagacaagaacacctgcaagctgcgcaagcctgataacgcatgggtactc
ggttacacgccgaacctcgtcgcaggcgtgtggtcgggcaatgccgacagttcctcaatg
tacgacaaaggagacggactcaatacgtcgagtcctctctggaaggaattcatggagcgc
gcacaccgcgtgctcacagcgcccaagacggccttcacgcctccttcgggcatcatccag
ccgcagatctccaccctctcaggcgagctgccctctccctgcacgccgattcagtaccgc
cgaccggatattttcctcgaagagcgtccgcccactctgcaggatcccgcctgcgcgcag
ctcatcgttgaccgtgtgacacaccttctcgcttcagatgcgtgcccgcaggcagcgcag
gagtcggggagcttcctcgtggcgaagagcatcctccccgaccgctggccgacgtgggaa
gagggtgtgcagaagtgggtgggggagcagatgacgctgtggtacgcgtcgtccgatcat
tcgggttccattctccccctgcctgtcgctcccacggagaagtgcgatcccgctctcacc
cccggaaggctcgacaagcccacgctcacgattctgtctcccgatgagaacggttcggtg
acgtatcccgcattccgtcccaagctccagtatcgcgtgggttcggcggtgcgcgagatc
cgcttcgaaatcgacggcaaacgggtggcggtacgcacagcagcaccgttcgatgagccg
ctgcgcgttccgcggtcggtggaccgtgaggaatctcacacactcaccgtgactgtgacg
gatgagtactacaacgccgtcaccgagacggtccgtttccactttggggaaggagagggt
gccggtctctcggtttcctttctggaaccggagggagacaccacgattgcacagggggaa
acactttccatgaacgtgcaggtgcaggatgacgacggcgtgctcaaatatgtccagttc
tatctggatgagacgttgctcacgacaaaaccgcgggagccattcagcctcacgtacggt
gtcacggtgagtccgggaacctatcgtctccgcgccgtggccacggatctttcgggcaag
accacggacgataccgtcacggtgaccgtcacggagaagcggtga
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