Candidatus Peribacter riflensis: PeribacterA2_0967
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Entry
PeribacterA2_0967 CDS
T04147
Name
(GenBank) ATP-binding cassette, subfamily B, bacterial MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
prf
Candidatus Peribacter riflensis
Pathway
prf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
prf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PeribacterA2_0967
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prf02000
]
PeribacterA2_0967
Enzymes [BR:
prf01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PeribacterA2_0967
Transporters [BR:
prf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PeribacterA2_0967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_14
DEAD
AAA_23
RsgA_GTPase
AAA_16
DUF87
nSTAND3
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ALM10327
UniProt:
A0A0S1SRI7
LinkDB
All DBs
Position
complement(1015208..1017022)
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AA seq
604 aa
AA seq
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MQKHERTNVGKTLYLLQRIRIHPAYLLIPLFFSLLAAAFEGIGMGLLVPILNGFLNKSFA
FATGIPVLGKALQLLPDTFLANDRLLFVVFLGGFIAVYVLKNALRFLANASMGYFSERCL
HHLRKALFAKYLSFGKLFFDTTNVGHHSTLLLHFSQNALYPVAALDGFVGALFSLAVYLV
VLLSISSKLTLVALPLFVLLHFAIRFMITRIKGLSRSIAEQGSALGRKSVEILSTIPLVK
SYQTERKEQDHYTSISDLKAKFDFRVRVLLGMILPLQEIITLLVVSIVMAGSFYVFGRAQ
IASAPALLVYFYIIMNASGKFGTVSGYRGVLANASGPLDAVLEIFDEEGKYFVRGGSTVF
PGLRDSIAFRHLTFSYLPDREVLHAVSFTVEKGKMTAIVGPTGGGKSTLISLLMRYYDCP
SASLFVDGTDIRELTLDSYIRRVALVSQETLLLHDTLRNNITYGLSHVPEERIQEALRRA
RLSDFIAKLPQGLETPIGDRGVKLSGGEKQRVSIARALLKDAEILILDEATSSLDSKTES
LIQEAIDDAVSGRTSIVIAHRLSTIKHADKIVVLEEGKVTEEGTLQELLEKKGAFFALWE
QQRF
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagcatgaacgcacgaatgtggggaagactctctacctgctccagagaatccgc
atccatccggcctacctgctgattccgctcttcttcagcctgctcgcggcagcctttgaa
ggaatcggcatggggctgctcgttcccattctcaacgggtttctcaacaagagtttcgcg
ttcgccactggcattccagttctcggcaaggcgctccagttattgcccgatacattcctg
gcgaacgatcgtctgctctttgtggtttttctcggcggcttcattgccgtgtatgttctc
aagaatgcgctgcggttcctcgcgaatgcctcgatggggtacttttcggagcgctgtctg
caccatctgcgcaaggcgctgttcgcgaagtacttaagcttcggcaagctcttcttcgat
accacgaacgtggggcaccacagtacgctcctcctgcacttctcgcagaatgcgctctat
ccggtggcggcgctggatggattcgtcggcgcactcttctctctggccgtgtacctcgtc
gtgctcctcagcatttcgtccaagctcacactcgtcgccctcccactcttcgtgctcctg
cattttgcgatcaggttcatgatcacgcggatcaagggtctttcccgttccattgcggag
cagggcagtgcactcggcaggaaatccgtcgaaatcctctcgacgattcccctcgtgaag
tcctaccagaccgagcgcaaggaacaagatcactacaccagcatcagcgacctgaaggcc
aagttcgattttcgcgtgcgcgtcctgctcggcatgatcctgcccctgcaggagatcatc
acactcctggtggtgtcgatcgtgatggccggatcgttctatgtgttcggccgcgcgcag
atcgcctccgctccggcgcttttggtgtacttctacatcatcatgaacgcctcgggaaag
ttcggcacggtctcgggctatcgcggcgtgctcgcgaatgccagtgggcctctggatgcc
gtgctcgagatcttcgacgaagagggcaagtacttcgtacggggcggcagcacggtgttc
cccggtctgcgtgattccatcgcattcaggcatctgaccttcagctacctgccggatcgc
gaggtgctgcacgccgtctctttcacggtggagaaaggcaagatgacggccatcgtcggg
cccacgggcgggggcaaatccacgctcatcagtctgctcatgcggtactacgactgcccg
tccgcatcgctcttcgtcgacggaacggatattcgtgagctcaccttagactcgtacatc
cggcgggtggcgctggtgagtcaggagacactccttctccacgatacgctgcgcaataac
atcacgtacggactctcgcatgtgccggaagagcgtattcaggaggcgctcaggcgcgca
cgcctctccgatttcatcgcgaagcttccacaggggctcgagacccccatcggcgaccgc
ggggtgaagctctcgggcggtgagaagcagcgtgtttccatcgcgcgcgcgctcctcaag
gatgccgagatcctcattctcgatgaggcgaccagttccttggacagcaaaaccgaatcg
ctcatccaggaggcgattgatgacgccgtgagcggccgcacctccatcgtcatcgcgcac
cgcctgagcacgatcaagcacgccgacaagatcgtggtgctcgaggaaggaaaggtcacc
gaggaggggacgctccaggagcttctggagaagaaaggtgcctttttcgctctctgggaa
cagcagagattttag
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