Candidatus Peribacter riflensis: PeribacterA2_1087
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Entry
PeribacterA2_1087 CDS
T04147
Name
(GenBank) nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
prf
Candidatus Peribacter riflensis
Brite
KEGG Orthology (KO) [BR:
prf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prf03032
]
PeribacterA2_1087
03036 Chromosome and associated proteins [BR:
prf03036
]
PeribacterA2_1087
03400 DNA repair and recombination proteins [BR:
prf03400
]
PeribacterA2_1087
DNA replication proteins [BR:
prf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PeribacterA2_1087
Chromosome and associated proteins [BR:
prf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PeribacterA2_1087
DNA repair and recombination proteins [BR:
prf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PeribacterA2_1087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ALM10443
UniProt:
A0A0S1SQ63
LinkDB
All DBs
Position
complement(1147595..1147870)
Genome browser
AA seq
91 aa
AA seq
DB search
MSKQDLINAIADAAGITKRAAASSLDSLITLVTKELKRGNTVTITGFGTFKVSKRAARMG
VNPRNPTQRISIPAMKVPSFKAGKTLKDAVR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcaggatctcatcaacgcgatcgcggatgcagccggcatcaccaagcgcgcc
gctgcttcgtcgctcgattctctgatcacgctcgtcaccaaggagctcaagcgtggcaac
accgtgacgatcacgggcttcggaaccttcaaggtctccaagcgtgcagcccgcatgggt
gtgaatccgaggaaccccacgcagaggatctccatccctgcaatgaaggtcccgtccttc
aaggccggcaagaccctcaaggacgccgtccggtaa
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