Candidatus Peribacter riflensis: PeribacterA2_1100
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Entry
PeribacterA2_1100 CDS
T04147
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
prf
Candidatus Peribacter riflensis
Pathway
prf00550
Peptidoglycan biosynthesis
prf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
prf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PeribacterA2_1100
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prf01002
]
PeribacterA2_1100
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prf01011
]
PeribacterA2_1100
Enzymes [BR:
prf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PeribacterA2_1100
Peptidases and inhibitors [BR:
prf01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
PeribacterA2_1100
Peptidoglycan biosynthesis and degradation proteins [BR:
prf01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
PeribacterA2_1100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
DNA_ligase_A_C
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ALM10455
UniProt:
A0A0S1SJC8
LinkDB
All DBs
Position
1160145..1161065
Genome browser
AA seq
306 aa
AA seq
DB search
MSSVLSVLLLGLFPVAAEIPPPPPPFASLVGVPIAPLQERISIGRRLSASGIIVIDLASG
QMLYGSQADVERPMASLTKLMTALLIVEHHDLDEWVTVPKEATEITGSVAYLPPGEQFTV
GDLLSALLVASANDAAVTLARFHSGSTEAFVKEMNARAAALGLTGTQYANPSGMDDPRQW
STPRDIARLTAHIQKEPALRERLALKGTRIAGKSGQEIALTHTHALLRARNPFVEEGKTG
TTNAAGQCLVSVVGEGEREYVVVLLHSQQRYDDMKAILASLFGAEGTTDIPVQDTECAQG
GGCPAP
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagttcggtgctctccgtgctcctcttgggtttgttccccgtggcagccgagattcca
cctccccctccaccgttcgcttctctcgtcggggtacccattgccccgcttcaggaacgg
atctcgattggccgtcggctctccgcctcgggcattatcgtgatcgaccttgcctcgggt
cagatgctctacggatctcaggcggatgtcgagcgacccatggccagtctcactaagttg
atgactgcgttgctcatcgtagagcatcatgatcttgatgagtgggtgaccgttcccaag
gaggcgacagagatcacgggcagcgtggcgtacctcccgcccggcgagcaattcacagtg
ggggatctgctctctgcgctcctcgtcgcctcggccaacgatgcggcggtgacgctggcg
cgctttcacagcggctccaccgaagcgttcgtgaaagagatgaatgcgcgtgccgcggcg
ctcgggctcaccggcacacagtacgcgaacccctcgggcatggatgatccccgtcagtgg
tccaccccgcgcgacattgcccgcctcaccgcgcacattcagaaggagcctgcactgcga
gaacggctggcgctgaaggggaccaggatcgcgggtaagagcggccaggagatcgcactc
acgcatacgcatgcgctcctccgtgcacgcaatcccttcgtcgaggagggcaagaccgga
acgacgaatgcggcgggacagtgtctcgtgtcggtggtgggcgaaggggagcgtgagtat
gtggtggtgctgctccactcgcagcagcgctacgacgatatgaaggccattcttgcatcg
ctctttggagcggaaggtacgaccgatattcccgtacaggacacagagtgtgcccaggga
ggcggttgtcccgctccgtag
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