Providencia rettgeri: RB151_002470
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Entry
RB151_002470 CDS
T04571
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
prg
Providencia rettgeri
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prg03400
]
RB151_002470 (phrB)
Enzymes [BR:
prg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RB151_002470 (phrB)
DNA repair and recombination proteins [BR:
prg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RB151_002470 (phrB)
Prokaryotic type
RB151_002470 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
APC09962
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All DBs
Position
complement(258934..260376)
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AA seq
480 aa
AA seq
DB search
MAAKQVCHLIWFRNDLRVTDNKALSSACADPQANVIALFTATPEQWQQHDVSPRQISFIH
QHLIELQRSLAKLGIPLVCQTVANFMDAAEWVLNYAKTQQADALFFNRQYEWNEKQRDDW
LVKNAHGVHIHAFDDFLLLPPGSVTNQKGEMYQVYTPFRRAFLTQLTTTDCRSLRVPNKR
ADSLNIKETAPLFPHEHIAVSQQFPIGEQAALKQLRQFCTQHVTRYQQDRDIPSIHGTSQ
LSPYLAIGVLSPRQCFNRLQAENPDVLDYPDSGAFTWLNELFWREFYSHLLVAFPHLCRY
QPFIQWTQHIHWNNSSTDFDAWKTGKTGYPIVDAAMRQLNETGWMHNRLRMIVASFLVKD
LLIDWRKGEKYFISQLIDGSLAANNGGWQWSASTGVDACPWFRIFNPTTQGKKFDAQGKF
IRRWLPELNNVPDKYIHTPHEWSLINNTPLDYPEPIVDHKQARLATLEAFEAGKRNSLKQ
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaacaagtttgtcatcttatctggttccgcaatgatttacgggtcactgat
aacaaagcactatcctctgcttgtgcggacccccaagccaatgttatcgccctcttcact
gccacgccggaacaatggcaacaacacgatgtatcgccaaggcaaatttcgtttatccac
cagcatctcattgaattacaacgttctcttgccaaattaggtatcccattagtttgccaa
acggtggcgaattttatggatgcggccgagtgggtattaaactatgctaaaactcagcaa
gctgatgccttgttctttaatcgccaatatgaatggaatgaaaaacaaagggatgactgg
ctggtaaaaaatgctcatggagtgcatattcatgcttttgatgattttttgttattgccg
ccgggttctgtgaccaaccaaaagggggaaatgtaccaagtgtataccccttttcgtcgt
gcctttctcacccaattaaccaccacagactgccgttcattgcgtgtaccaaacaaaaga
gccgactctttaaatatcaaagaaaccgcccctttattcccacatgagcacatagcggtt
tcccagcaattccctattggtgaacaagccgccttaaaacaactaagacagttctgtact
caacacgtcacacgctaccagcaagatagagatatcccctctattcacgggaccagccaa
ttatcgccatatcttgccattggtgtactgtcacctcggcagtgttttaaccggttacaa
gcagaaaacccagatgttttagattaccctgatagcggtgcattcacttggttaaatgaa
ttgttctggcgtgaattttatagccatttactcgtcgcatttccacatctttgtcgctat
cagccatttattcaatggactcaacatattcattggaataattcatcaactgatttcgac
gcatggaaaaccggaaaaacaggttatcctattgttgacgccgccatgcgacaacttaat
gaaactggttggatgcataatcgcttgcgtatgattgtcgcaagcttcttagtaaaggat
ttgcttatcgactggcgcaaaggtgaaaaatatttcatcagccaactgattgatggcagc
ctagccgcaaataatggtggttggcagtggtctgcatcaacgggggtcgacgcttgcccg
tggtttcgtattttcaacccaacaacccaagggaaaaagttcgatgcccaagggaaattt
atacgccgctggctgccagagctaaataacgtacccgataaatatattcataccccccat
gaatggtctctaatcaacaatacacctctcgattacccagaaccgattgttgaccataag
caagcccgtttagccactttagaagcttttgaagcagggaaacgtaatagtctaaaacag
tag
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