Providencia rettgeri: RB151_002530
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Entry
RB151_002530 CDS
T04571
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
prg
Providencia rettgeri
Pathway
prg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RB151_002530 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prg03400
]
RB151_002530 (alkA)
Enzymes [BR:
prg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RB151_002530 (alkA)
DNA repair and recombination proteins [BR:
prg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RB151_002530 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
APC09968
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All DBs
Position
complement(266887..267786)
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AA seq
299 aa
AA seq
DB search
MKTFLVKLPLPSHYLSSDFFAFHLRDQQNVAEIVEGNTLHKGLIWQQQAAKLNLMIKNQQ
ATLSLEIDSPTVIPQESELHSLAKHLLGLNQPVEQFEAQYMTDPIIGKLIKKQQGLRIYQ
SANAFEALVWAIIGQQISVHAAIAIRRRFIQAVGLQHTSGIWCFPDVLQVSQVSDDTLRQ
AGFSIGKVVALRALCDAIENQQIDLSQQINHENVNFITEQLLQIKGIGPWTVSYALLRGF
NYLNGSLHGDVAVRRNLQTLLTKQEPPTAKETEKWLTQFSPWRALVAAHLWRSQSAAGY
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatttttagttaaactccccctaccctcacattatctttctagtgatttcttc
gcctttcatcttagagaccaacaaaatgtcgcagaaattgttgaaggaaataccttgcac
aaaggattaatctggcaacaacaagctgcaaaattaaatttaatgattaaaaatcagcaa
gcaacgctatcactggaaattgactcaccaaccgttatacctcaagagtctgagcttcat
tctctcgcaaaacatttattaggattaaaccaaccagttgaacagtttgaagcgcaatac
atgacagacccaataattgggaaactgattaaaaaacaacagggattaagaatttatcaa
tcagctaatgcctttgaagccttagtttgggctattattggtcaacaaatcagtgttcat
gctgcaattgcaattcgccgaagatttatccaagcagttgggcttcaacatacctcagga
atttggtgttttccggatgtactgcaagtttctcaagttagtgacgatacccttcgccaa
gcagggttttcaattggtaaagtcgttgctctgagagcgctttgtgacgcaatagagaac
caacaaattgacttatcacagcaaataaaccatgagaacgtaaatttcatcactgaacaa
ctattacaaattaaaggtattggtccttggacggttagctatgcactccttcgtggattt
aattacttaaatggctctttacatggcgatgttgcggtcaggcgtaatttgcaaacgttg
ctgactaaacaagagccaccaacggctaaggaaacagaaaaatggctaacacagttttct
ccttggcgagcccttgttgccgcccatttgtggcgtagtcaatctgctgcgggttattaa
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