Providencia rettgeri: RB151_003560
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Entry
RB151_003560 CDS
T04571
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
prg
Providencia rettgeri
Pathway
prg03030
DNA replication
prg03410
Base excision repair
prg03420
Nucleotide excision repair
prg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RB151_003560 (polA)
03410 Base excision repair
RB151_003560 (polA)
03420 Nucleotide excision repair
RB151_003560 (polA)
03440 Homologous recombination
RB151_003560 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prg03032
]
RB151_003560 (polA)
03400 DNA repair and recombination proteins [BR:
prg03400
]
RB151_003560 (polA)
Enzymes [BR:
prg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RB151_003560 (polA)
DNA replication proteins [BR:
prg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RB151_003560 (polA)
DNA repair and recombination proteins [BR:
prg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RB151_003560 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RB151_003560 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Prok-E2_E
HHH
Motif
Other DBs
NCBI-ProteinID:
APC10070
LinkDB
All DBs
Position
379661..382453
Genome browser
AA seq
930 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVINMLRSLVMQYKPSHVAV
VFDAKGKTFRDELFESYKSHRPPMPDDLRAQIEPLHSMVEAMGLPLLVVSGVEADDVIGT
LACEASRNGTPVLISTGDKDMAQLVEPNITLINTMNNTILGPDEVQEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTALALLQGIGSLEKIYENLEAIAPLGFRGSKTLAPKMAENR
ELAFLSYQLATIKTDVKLDKTCEELRVDQPDVDKLHQLFSRYEFKRWLSDVENGTWMEGK
GSTAKANPAIATSTAKVSVPTAPTLNAENYQTILEKADLERWVEKLSSASLFAFDTETDS
LDTQEARLVGMSFAIEAGHAAYLPLAHDYLDAPAQLPLDEVLQAMKPILESEKILKIGQN
LKYDAEVLENYDIELKGIGYDTMLESYVLNSVAGMGRHDMDSLAERHLNHKTVSFEEIAG
KGKKQLTFNQIALEQASNYAAEDADVTLLLHQALYPQLEAEPKLNHIFKNIEMPLVPVLV
RMERKGVLIDATVLAAQSKIITARLAELEKEAFELAGEEFNLASPKQLQAILFEKLQLPV
IKKTPSGAASTNEEVLEELALNHALPKLLLEHRSLAKLKSTYTDKLPLMINPCTQRVHTS
YHQAVTATGRLSSRDPNLQNIPVRTEEGRRIRQAFVAREGYKVMAADYSQIELRIMAHLS
QDKGLLTAFAEGKDIHKATAAEVFGVPLEQVTSDQRRSAKAINFGLIYGMSAFGLARQLG
IPRGEAQRYMDLYFERYPGVLRYMENTRLQASEQGYVETLEGRRLYLADIKSSNGMRRKA
AEREAINAPMQGTAADIIKKAMIAVDEWLQTEKPHADMLMQVHDELVFEVKESELEQVQA
QVQTLMEQSMKLDVPLKVDIGIGNNWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattgcagaaaaccctcttattttggttgatggttcctcttacttataccgt
gcttaccatgcatttccacctctgaccaacagtgctggtgaacctacaggggctatgtat
ggcgtaattaatatgctgcgtagcttggtcatgcaatataaacctagccatgttgctgtt
gtctttgatgcgaagggaaaaacatttcgtgatgagttattcgaaagttataaatctcat
cgcccgccgatgccagatgatttacgcgcacaaattgaaccactacacagtatggttgaa
gctatggggctaccgttgctcgttgtttctggtgtagaagctgatgatgtaataggtact
ttggcctgtgaagctagtcgtaacggtacacctgttttgattagtactggtgataaagat
atggcacaacttgtggagcctaatattacgctcatcaataccatgaataacactatttta
ggtccggatgaggttcaagaaaaatatggggtaccacctgagcttatcatcgatttctta
gcgttaatgggggattcatcagacaatatcccaggtgtgcctggtgttggtgaaaaaaca
gcgctggctttattacaagggattggcagcttagaaaaaatatatgagaacctagaagct
atagcgcctttgggctttagagggtctaaaacattagcgccaaaaatggctgaaaatcgt
gaattagctttcttatcataccaactggccactattaaaacggatgttaagttagacaaa
acctgtgaagagttacgcgtcgatcaacctgatgtagacaaattgcatcagttgtttagc
cgttatgaattcaagcgctggttgtctgatgtagaaaatgggacgtggatggaaggtaaa
ggttcaactgctaaagcaaatccggctatagcaacatctacggcaaaagtctcagtaccg
acggcccccaccttaaatgctgaaaattaccaaacaattttagaaaaggcagacttagag
cgctgggtggaaaaattgagctcagcatctttgtttgcttttgatactgaaacagatagc
ttagacacacaagaagcgcgccttgtggggatgtcatttgcaattgaagcgggtcatgcc
gcctacctaccgttagcccatgattatcttgatgcaccagctcagttgccactggatgaa
gttttacaagcaatgaaaccgatactggaaagtgaaaaaatcctcaaaatcgggcaaaac
ttgaaatatgatgcggaagttcttgaaaattatgacattgagttaaaaggtatcggctac
gatacgatgttggagtcgtatgtgctcaatagcgttgcggggatgggccgtcatgatatg
gacagtttggctgagcggcatttgaaccataagacagtgagttttgaagaaattgcgggc
aaaggcaaaaaacagctaactttcaatcaaatcgcgttagagcaggcctcgaactatgcg
gcagaagatgctgatgtaacattattactgcaccaagcactgtatcctcaattggaagct
gagccaaaacttaaccatatttttaagaatatcgaaatgccattagttcctgttttagtc
agaatggagcgtaaaggggttttgattgatgcaacagtattagctgcacagtcgaaaatc
attactgcgcgtttagcagaacttgaaaaagaagcgtttgagctcgctggtgaagagttt
aatctggcatcaccaaaacaattacaggcaattttatttgaaaaattacaactacctgtt
atcaaaaaaacgccaagtggtgcagcctcgaccaatgaagaagtacttgaagaacttgca
ttaaaccatgctttaccaaaattacttctggagcatcgtagtttagctaaattgaaatcg
acttacacagataaactaccgcttatgataaacccatgtacgcagcgtgtgcatacgtcg
tatcatcaagccgttacggcgactgggcgtttgtcttcaagggacccaaacttacaaaat
atcccagtaagaacagaagaaggccgccgtattcgccaagcttttgttgcacgcgaaggc
tataaagtcatggctgcggactattcacaaattgaattacgtatcatggcacatttatct
caagataaaggcctactcactgcatttgcggaaggcaaggatattcacaaagcaacggca
gcagaggtatttggtgttccacttgaacaagtaaccagtgatcagcgtcgtagtgctaag
gcaattaacttcggtcttatctatgggatgagcgcattcgggctagcaaggcaattaggt
atcccgcgtggtgaagctcaacgttatatggatctctattttgaacgttacccaggtgtt
ctacgctatatggaaaatacacgtctacaagcatcagaacaaggctacgttgaaacacta
gaagggcgcaggctttatttggctgatataaaatcaagtaatggtatgcgccgtaaagct
gctgaacgtgaagctatcaatgctccaatgcaaggaacagctgctgatattattaaaaaa
gcaatgattgctgtcgatgagtggctacaaacagagaaaccccatgctgatatgctaatg
caagttcatgatgaattagtgtttgaagttaaggagtcagaactcgaacaggtacaagca
caggttcagacattaatggagcaaagcatgaaactggatgttccgttaaaagtagatatt
ggaataggtaataattgggatgaagctcattaa
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