Providencia rettgeri: RB151_005180
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Entry
RB151_005180 CDS
T04571
Symbol
vnfA
Name
(GenBank) Nitrogen fixation protein VnfA
KO
K14414
transcriptional regulatory protein RtcR
Organism
prg
Providencia rettgeri
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prg03000
]
RB151_005180 (vnfA)
Transcription factors [BR:
prg03000
]
Prokaryotic type
Other transcription factors
Others
RB151_005180 (vnfA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_22
NACHT
MCM
AAA_19
AAA_14
AAA_2
AAA_7
T2SSE
ATPase_2
AAA_33
TsaE
AAA_30
ResIII
DUF3038
ABC_tran
TRAP-delta
Motif
Other DBs
NCBI-ProteinID:
APC10228
LinkDB
All DBs
Position
569533..571113
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AA seq
526 aa
AA seq
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MNKKRKVVIGVLGTVLDRRGKKANRWTKWRPTVGLCQQPNLDIGRFELLHQVNDYGMAHR
VKEDIEQASPNTEVVLHEVDIADPWDFEEVYTSLLDFSSHYQFDTDNEEYLVHITTGTHV
VQICWFLLTEAHYLPAKLIQTSPSQKGREKDPAGIHAVIDLDLSRYAHITSRFQTEQQQQ
VSFLKSGIATRNAAFNTMIEQIERVALRSKAPILLNGPTGAGKSFLARRIYQLRESRHQV
KGRFVEVNCATLRGDNAMSTLFGHVKGAFTGAINPRRGLLKEADGGILFLDEIAELGLDE
QAMLLKAIEEKSFFPYGSDEEIHSDFQLIAGTHRNLAQQVEEGKFREDLFARINMWTFAL
PGLRDRREDIEPNIDYELAKFCQDQQSQIRFDSEARNVYVKFACSPQAHWRGNFRELGAS
INRMATFAERGRITKAVAEEEIGRLQAQWQSKSTNTLPKQIGEIDLFDQQQLATVLEVCR
RSSSLSEAGRELFAISRQHKKQPNDADRLRKYLAKFGLDWDGVRKG
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaacgcaaagtggtcattggtgtattgggcacagtactcgatagaagaggc
aaaaaagccaatcgctggacaaaatggcggccaacggttggcctttgccaacagcctaat
ttggatattggtcgttttgaattactgcatcaggtgaatgactatggcatggcgcaccgg
gtgaaagaggacattgaacaagcttctcccaatacggaagtggtactgcatgaggtggat
attgctgacccgtgggattttgaagaggtttatacctcattactggatttttcttcgcat
tatcaatttgatactgataatgaagagtatctggtacatatcactacgggtacccatgtg
gtgcaaatttgctggttcttattaaccgaggctcattacctgcctgcgaagttaattcaa
acctccccaagccaaaaggggcgggagaaagaccctgccggtattcatgcggtgatagac
cttgatcttagccgttacgcccatatcaccagccgtttccaaacagagcagcaacagcag
gtttcgtttttaaaatcgggtattgccacccgcaacgcggcatttaataccatgattgag
caaatcgaacgcgtcgcattacgctctaaagccccgattttactcaatgggccaacgggg
gcggggaagtctttcttagctcggcgaatttatcaactgcgtgaaagccgccatcaagtt
aaagggcgatttgtggaagtaaactgtgcaacgcttcgtggtgataacgctatgtcgacg
ctgtttggtcatgtaaaaggggcgttcacaggggcaatcaacccaaggcgtgggttactg
aaagaagcggatggcggtattttatttctcgatgaaattgcggaacttgggctagatgaa
caagcaatgctattgaaagccattgaggagaaaagcttttttccttatggttcagatgaa
gaaattcacagtgactttcaattaattgcagggactcaccgtaatttggcgcagcaagtg
gaagagggcaaatttcgtgaagacttatttgcccgtatcaatatgtggacatttgcctta
ccgggcttgcgtgaccgccgtgaagacatcgaaccgaatattgattatgaattagccaaa
ttttgccaagaccaacaaagccaaattcgttttgatagcgaagctcgaaacgtttatgtg
aagtttgcctgttcccctcaagcccattggcgtggaaatttccgtgagttgggtgcctcc
attaaccgaatggcaacgtttgctgaacgcgggcgtattaccaaagcggtagccgaagag
gaaattggccgtttgcaagctcaatggcagtcaaaatcaaccaatacattaccaaagcaa
attggcgaaattgatttattcgaccagcaacagttagcaaccgtgctggaagtttgccgg
cgttcatcttctttgtcagaagcggggcgtgagctgtttgccatttcacggcaacataaa
aaacagccaaatgatgcagataggctgcgaaaatatttggcaaagtttgggttagattgg
gatggggtgagaaagggataa
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