Providencia rettgeri: RB151_010620
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Entry
RB151_010620 CDS
T04571
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
prg
Providencia rettgeri
Pathway
prg03030
DNA replication
prg03430
Mismatch repair
prg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RB151_010620 (holA)
03430 Mismatch repair
RB151_010620 (holA)
03440 Homologous recombination
RB151_010620 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prg03032
]
RB151_010620 (holA)
03400 DNA repair and recombination proteins [BR:
prg03400
]
RB151_010620 (holA)
Enzymes [BR:
prg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RB151_010620 (holA)
DNA replication proteins [BR:
prg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RB151_010620 (holA)
DNA repair and recombination proteins [BR:
prg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RB151_010620 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
PhaP_Bmeg
Motif
Other DBs
NCBI-ProteinID:
APC10756
LinkDB
All DBs
Position
complement(1195753..1196784)
Genome browser
AA seq
343 aa
AA seq
DB search
MTRIYPEQLASSLQETLRGRYLIWGNEPLLLQESQDAIRKAAQQQGFEEHFVYSLEQNTD
WDEIFSQCQALSLFASRQTLTLLLPENGPNAAMAEKLSQLSQLLHPDLLLVLRGHKLTKT
QENSGWFKALSKEAVYVSCLTPEYQRLPQWVSKRAYSMRLSLEAEANQLLCYCYEGNLLG
LAQALERLSLLYPDGKLTYPRVENAVNDSAHFTPYHWVDALLAGKSRRSWHILEQLQHED
VEPVILLRSIQRELILLITLKRQSVTTPLKTLFDQHKVWQNRRGMISEALQRLTLHQLQS
ALMLLTQAEIHIKQDFSHSAWPDLQSLSMLLCGKAFAENFIHD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtatttaccctgaacagctggcctcttcgttacaagaaacgctaagaggccgc
tatttgatttggggcaatgagccccttctacttcaagaaagtcaagatgccatccgcaaa
gctgcccaacaacaaggctttgaggaacattttgtgtattctcttgagcagaacactgac
tgggatgaaatttttagccaatgtcaggcgctaagcttattcgctagtcgtcaaactctg
acgctgttattacctgaaaatggccccaacgcagcaatggcggaaaaattaagccagttg
tcgcagttacttcacccagatctactccttgtactacgtggacataaactaacaaaaacc
caagaaaacagcgggtggtttaaagccctcagtaaagaggcggtgtatgtcagttgcctg
acgcctgaataccaacggctccctcagtgggtatcgaaacgcgcgtacagtatgcgctta
tctttagaagccgaagccaaccaactgctctgttattgctacgaaggtaatttactaggt
ttggcgcaagcccttgaacgcctgtcattactgtaccctgatggcaaactcacctacccc
cgagttgaaaatgcagttaatgattctgcccattttacaccgtaccattgggtcgacgcg
ttacttgcaggtaaatcacggcgttcatggcatattttagaacaacttcaacatgaagat
gttgaacccgtcattttgttacgttcaatacaacgtgaattaatactgcttattacgtta
aaacgccaatcagtcacaacaccattgaaaacgttatttgaccaacacaaagtttggcaa
aaccgccgtggaatgatctctgaagcactacagcgtttaacgttgcatcaattacaatct
gcactaatgttattaacacaagctgaaatccatattaaacaagattttagtcactcagca
tggcctgacctacaatcactatctatgttattatgtggtaaagcatttgcagagaatttt
attcatgactga
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