Providencia rettgeri: RB151_011810
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Entry
RB151_011810 CDS
T04571
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
prg
Providencia rettgeri
Pathway
prg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RB151_011810 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prg03019
]
RB151_011810 (rhlE)
Enzymes [BR:
prg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RB151_011810 (rhlE)
Messenger RNA biogenesis [BR:
prg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RB151_011810 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
UTP25_NTPase-like
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
APC10866
UniProt:
A0AAQ0E2F7
LinkDB
All DBs
Position
1322722..1324047
Genome browser
AA seq
441 aa
AA seq
DB search
MTTFSDLALNEEILLAINELGYESPTPIQQQAIPAVLAGSDLLASAQTGTGKTAGFTLPI
LQKLVTTPRAGNNRKPIRALILTPTRELAAQVAENVKEYSRHLRIRSFVVFGGVSINPQM
MKLRGGVDILIATPGRLLDLAHQNAVDLSQVEVFVLDEADRMLDMGFIHDIRRVINKLPK
KRQNLLFSATFSDEIKQLANKLLNNPVTIEVAPRNSASEQITQYVHLVDKKRKSELLSFM
IGRENWQQVLVFTRTKHGANRLAEHLNKDGIKAAAIHGNKSQGARTRALADFKSGDIRVL
VATDIAARGLDIEQLPYVVNFELPNVAEDYVHRIGRTGRAEATGMAVSLVCIDEAKLLKD
IEKLLKKPIPRMSVEGYEPDPSIKAEPIQKTPQRGERRSSGASSNKPRRTNVSTAKPSTG
KTLSSPWKNAQKKAKQGRHEG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
ttgactactttttcagacctcgcattaaacgaggaaatcttgcttgccattaatgaatta
ggctatgaaagtccaacgccaattcaacaacaagcgatcccagcagtgcttgcaggaagc
gaccttttagccagcgcacaaacaggcaccggtaaaactgcgggttttacgttgccaatt
ttacaaaaactggttactactcctcgtgctgggaataatcgtaagccaattcgcgcatta
attttgacgccaacaagggagcttgcggcacaagttgctgaaaatgtaaaagagtatagt
cgtcatctacgtattcgttcgtttgtggtttttggcggtgtaagtattaaccctcagatg
atgaagttacgcggaggcgtggatattttaatcgcgaccccagggcgcttgttagattta
gctcatcaaaatgcggttgatctttctcaagtagaagtatttgtgttagatgaagctgac
cgcatgttagatatggggtttattcatgatatccgccgagttattaacaaattacctaaa
aaacgtcaaaatttattattttctgctactttttcagatgaaattaagcagttagcaaat
aagttactgaataacccagtgaccattgaagtggctcctcgtaattcagcttctgaacaa
attactcagtatgttcatttagttgataaaaaacgtaaatcggaattactttcttttatg
attggtcgtgagaattggcaacaagttttagtctttactcggacaaaacatggggctaat
cgtctagctgagcatttgaataaagacggtattaaggctgcggctattcatggtaataaa
agccaaggtgctcgtacacgtgctttagccgattttaaatcgggggatattcgagtctta
gttgcaaccgatattgcagcacggggcttagatattgaacaactgccttatgttgtaaat
tttgagctgcctaatgttgctgaagattatgtacatcgtattggtcgtactggccgtgct
gaagcgacaggtatggcggtttcattagtgtgtattgatgaagctaaattgcttaaagat
attgaaaaattacttaaaaagccgattccaagaatgtctgtagagggctacgagccggac
ccttctattaaagcggaacctattcaaaaaacaccacaacgtggtgagcgccgttcgagt
ggggcttctagcaataaacctcgtcgtaccaatgtatccacggctaagcctagtacgggg
aaaacgttgagttcgccatggaaaaatgcacagaaaaaagctaaacaaggtcgtcacgaa
ggttaa
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