Providencia rettgeri: RB151_013080
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Entry
RB151_013080 CDS
T04571
Symbol
apxIB_1
Name
(GenBank) Toxin RTX-I translocation ATP-binding protein
KO
K12531
ATP-binding cassette, subfamily B, bacterial RtxE
Organism
prg
Providencia rettgeri
Pathway
prg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RB151_013080 (apxIB_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prg02000
]
RB151_013080 (apxIB_1)
02044 Secretion system [BR:
prg02044
]
RB151_013080 (apxIB_1)
Transporters [BR:
prg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RB151_013080 (apxIB_1)
Secretion system [BR:
prg02044
]
Type I secretion system
RTX toxin transporter
RB151_013080 (apxIB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
AAA_22
AAA_18
AAA_29
ABC_ATPase
AAA_21
Rad17
PRK
AAA_30
AAA_28
MeaB
CoaE
nSTAND3
NB-ARC
DUF4131
Cytidylate_kin
NTPase_1
RsgA_GTPase
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
APC10993
LinkDB
All DBs
Position
complement(1472652..1474751)
Genome browser
AA seq
699 aa
AA seq
DB search
MEQINNHGLDALVWVANYYQKNVSTDQLRHSIGMQTLSPTEWEIRECANTLGYETELIAI
PYTQLATIPLPALIYTQGSWQILQQEKDLVLINPVNNEIKLIQADDFNNEAEIDILLLKE
QQEPEQKRAFGFSWFVPSILRQHVKLRNIFILSAIIQLFALVSPLLFQNLVDKVLVGRSL
SNLHVIALAIFAIAVAEPIYGFIRNKIFSHTSSQISAELSGKIYRHLMALPLNYFKLRPT
GKIIARIRELAHIRQFLTGSTLMLFIDFIFVILFIAVLFSYSSLMSWILLGSMGVFFILW
MILGPIIRQQTEKSYQADENGLTFLTETITGIETVKTTATEKYFNQRWKKIFSKQLRQSF
KVSMRSEVASQLMTLVSKITTAIILWVGVKEVLNGGISPGELVAFNMLSAHVTQPVLRFA
QVWQDFQHTIISLRRVGDILDKPVENERKGIASTASIQGKIEFQNIRFRYQPDMPEVLNN
LSLSVKAGEFIGITGPSGSGKSTLTKLLQRLYVPQHGQVIVDGMDLAVADTVSLRRRMSV
VLQESMLFVGSIADNIRLSAPQASDEKVIHAAKLAGAYDFIMELPDTFNSPLSEKGLNLS
GGQRQRIALARALLTEPDILILDEATSALDYESEAAIMANMPLITQGRTVISIAHRLNTI
MHADKICVICHGEVTEMDTHENLLKLKGLYANLWQQQTQ
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaacagataaacaaccatggcttggatgccttagtttgggtggctaattattaccaa
aagaatgtttcgacagaccaactcaggcattcaattggtatgcaaactctttcgcctaca
gagtgggagatcagagaatgtgccaatacactaggctacgaaacagaactcattgctata
ccatatacacagttagcaaccatcccccttcccgcgttaatctatacgcaagggtcatgg
caaatcttgcaacaagaaaaagacctcgtactcatcaaccctgtaaacaacgaaatcaag
ttaattcaggctgatgattttaataatgaagctgaaatcgatattttattgcttaaagag
caacaagagccagagcaaaaaagagcttttgggtttagctggtttgttccttctattttg
cgtcaacatgttaaattacgaaatatctttattctatcagccattattcagcttttcgcc
ttagttagccctctactatttcaaaaccttgtagacaaagttttagtggggcgaagttta
tccaacttacatgttattgcattggcaatcttcgctattgccgttgctgagccaatatac
ggttttattcgcaataaaatttttagtcataccagtagccaaatcagcgccgaattatca
gggaaaatctatcggcatttaatggcgctccccttaaattatttcaaattaaggccaaca
gggaaaatcatcgcaaggatacgtgagctagcgcatatacggcaatttctgactggctca
actttgatgctatttattgacttcatttttgtgatcctctttattgcggttctattttcc
tatagcagcctaatgtcatggattttactcggttcgatgggggttttcttcattttatgg
atgatacttgggccaattattcgtcagcaaactgaaaagtcttatcaagcagatgaaaat
gggctcacgtttcttaccgaaaccattacaggaattgaaacggtaaaaactacagcaact
gaaaaatattttaatcaacgatggaaaaaaatattcagtaaacaactaagacaaagcttt
aaagtctcaatgcgcagtgaagtagcctctcagttaatgacattagtgagtaaaattaca
actgcaattatcttgtgggttggggtcaaagaagttttaaacggtggaatatcgcctggg
gaactcgtcgcctttaatatgctaagtgcccatgttactcagcccgtgctaaggtttgcg
caagtttggcaagattttcaacacactataatttcacttcgccgtgttggggatatactc
gataaaccagttgaaaatgaacgtaaaggcattgcgagcactgccagcattcaagggaaa
attgagtttcaaaatattcgttttcgttatcaacctgatatgccagaggttctcaataac
ctgtcgctatccgttaaagcaggggaatttattgggataacaggcccttccgggtcaggg
aaaagtactctgacaaaattattgcagcgtctttatgtaccacaacatggtcaagttatt
gtcgatggcatggatttagctgtagcagatacggtttcattacgccgccgtatgagtgtt
gttctgcaagaaagtatgctattcgtcggctctattgcagataatattcgcttaagtgcc
ccgcaagcttcggatgaaaaagttattcatgctgcaaaattagcaggcgcttatgatttc
ataatggagctgcctgacacgtttaattcccccttatcagaaaaaggccttaacctatca
ggtgggcaacgtcaaagaatagctctggcacgtgctttactaacagaaccagatattttg
atattagatgaagcaacttcggcattggattacgagtcagaagcggcaattatggcaaat
atgccgctaatcacccaaggcagaaccgttattagtattgctcatcgacttaacactatt
atgcatgctgataaaatttgtgttatttgccatggggaagtgacagaaatggatactcat
gagaatttactcaaattaaaaggcctgtatgccaacttatggcagcaacagacacaatga
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