Providencia rettgeri: RB151_019470
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Entry
RB151_019470 CDS
T04571
Symbol
ycfS
Name
(GenBank) putative L,D-transpeptidase YcfS precursor
KO
K19236
L,D-transpeptidase YcfS
Organism
prg
Providencia rettgeri
Pathway
prg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
RB151_019470 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prg01002
]
RB151_019470 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prg01011
]
RB151_019470 (ycfS)
Peptidases and inhibitors [BR:
prg01002
]
Cysteine peptidases
Family C82
RB151_019470 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
prg01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RB151_019470 (ycfS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
Motif
Other DBs
NCBI-ProteinID:
APC11623
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All DBs
Position
2128495..2129562
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AA seq
355 aa
AA seq
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MKRVLTAVSLFVMSALLAPAQAKEYPLPDSNTRLIGENLTYVVPNDGRPLEAIASDYQIG
LLGMLEANPGTDPYLPEAGKELIIPAQMLLPATPRTGIVINLAELRLYYYPANSENVIVY
PIGIGQLGRDTPEMVTSVSQSIKDPTWTPTANIRKNYAKEGITLPAVVPAGPENPMGLYA
LRLSYGRGEYLIHGTNADFGIGMRVSSGCIRLRPDDIEALFKTVPKGTRVQVIDQPVKYS
KEADGSYYIEVHQPLSRTSSDDPQTMPIKLSDDFKRFLENEGVDKGLVEKELARRSGMPV
RVNNDQGNSIPDTESQTQQGLVPIEPFSISQPEPIYDGKVGALLPAKYRSSAITQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagttttgacggcggtaagtttgtttgtcatgagtgctttgttggctccggct
caggcaaaagagtatccattacctgacagtaatacacgcctaatcggggaaaacctgacg
tatgttgtaccaaatgatgggcgcccgttagaagctatcgccagtgattaccaaataggc
ttattgggtatgttagaagcaaaccctgggacagacccttaccttcctgaagcgggcaag
gaactgatcatccccgcacaaatgctattacccgctacaccaagaacggggattgtcatt
aacctcgctgagcttcgtttatattattaccctgcgaatagtgaaaatgttattgtttac
ccaataggtattggtcaattggggcgtgacacgcctgaaatggtgacatctgtcagccaa
tcaattaaagaccctacatggacaccaacagcaaacattcgtaaaaattatgccaaagag
gggataactttgcctgcggtagttcctgcgggaccagaaaatccgatggggctatatgcg
ttacggttatcttatggtcgaggtgaatatttaattcatggtactaatgcagactttggt
attggcatgagagttagttcgggatgcattcgcttacggcctgatgatattgaagcatta
ttcaaaacggtaccaaaaggaacacgggtccaagttattgaccaaccggtgaaatattct
aaagaagcggatggaagctattatattgaagtacatcaaccgttatctcggacaagcagt
gatgacccacaaacgatgccaatcaaattgtctgacgatttcaagcgttttttagaaaat
gaaggggttgacaagggcttagtagaaaaagaactggcaaggcgttctggtatgcctgtg
agggtcaataatgatcaaggtaatagtattcctgatactgaaagccaaacacagcaaggt
ttagttcctattgaaccctttagtatctcacaacctgaacctatctatgatggtaaagtt
ggtgcattgctaccggctaagtaccgctcttctgcaataacgcaataa
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