Providencia rettgeri: RB151_023140
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Entry
RB151_023140 CDS
T04571
Symbol
rnb
Name
(GenBank) Exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
prg
Providencia rettgeri
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prg03016
]
RB151_023140 (rnb)
Enzymes [BR:
prg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
RB151_023140 (rnb)
Transfer RNA biogenesis [BR:
prg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RB151_023140 (rnb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
APC11986
UniProt:
A0A1J0E7Q4
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All DBs
Position
2494361..2496304
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AA seq
647 aa
AA seq
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MFQNNPLLAQLKQTLHAQTPRVEGLVKSTEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRV
IASVHTDKDREFAEPEELVEPFLDRFVGKIQKKENDNRLFVIPDHPSLKDMISCRPINGL
THEFKQDDWVVAHMRRHPLKGDKGFYAEITEYITEGDDHFAPWWVTLRRHQLDRDEPQMV
DSERDDQGIERTDLTHLHFVTIDSASTEDMDDALYVEKTADGDLKLFIAIADPTSYIHEG
SELDKLALARSYTNYLPGFNIPMLPRKLSDDLCSLRPNLRRPALVCTTLIKSDGSIDNNI
EFFSAWVESKTKLVYEEVSDWLENVGTWQPANDTDKQQIELLKEMADKRLQWRENNALVF
KDRPDYRFVLDDKGNVVDIVSERRRSSNRIVEEAMITANLCAAAVLKEKLGFGVFNVHMG
FEPLQIEQVVQTLKDHGIETTAESLLSLEGFRQLRRQLDAQPTQFLDSRIRRYQTFAEVK
ADPGPHFGLGFDAYATWTSPIRKYTDIVNHRLLKSIIAGKPSPDKPSEELSIKLAERRRA
NRMAERDVGDWLYSRYLKPFAGTDTKFPAEIIDITRGGIRVRLVDNGAVAFVPAPFIHSV
RDEIQCSQETGAVLIKGEQAYQLNDIINVTIAEVRMETRNIVARPAE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaacaacccactgctcgcgcaacttaaacagacgttacatgcccagacccca
cgcgttgaagggctggtaaaaagcacagaaaaaggttttggctttctcgaagttgatggc
caaaaaagttactttattccacctccacaaatgaaaaaagtaatgcacggtgaccgtgta
attgccagtgttcatacagataaagaccgtgaatttgctgaaccggaagagcttgttgag
ccttttttagataggtttgttgggaaaattcagaaaaaagaaaatgataatcgcttattt
gtcattcccgaccatccttcactcaaagatatgatttcctgccgtcccattaacggcctt
acccacgaatttaagcaagatgattgggttgttgcccacatgcgccgtcaccctttaaaa
ggtgataaaggcttttatgcagaaattaccgaatacattactgagggtgatgaccatttt
gcaccttggtgggtaacgttacggcgtcaccaattagaccgtgacgaaccgcaaatggtt
gatagcgaacgtgacgatcaaggcattgaacggactgacttaacccatttgcatttcgtt
actattgatagcgcaagcactgaggatatggatgacgccctgtatgttgaaaaaacagca
gatggcgatttaaaacttttcatcgccattgccgaccctacaagctatatccacgaaggg
agtgaacttgataaactggcattagcgcgctcttataccaactatttgcccggtttcaat
atcccgatgctgccgcgtaaattatctgatgacctgtgctccttacgcccaaatttacgt
cgccccgctttagtttgtacaacgttaattaaatcagatggtagtatcgataataatatt
gagtttttcagtgcttgggttgaatcaaaaacaaaactggtttatgaggaagtctctgat
tggcttgaaaatgtaggtacttggcaaccagcaaatgatacagataaacagcaaatcgaa
ctactcaaagaaatggctgataaacggttacaatggcgtgaaaataatgctttagtcttt
aaagaccgcccagattatcgtttcgtgctagatgataaaggaaatgtagtagatatcgtt
tctgaacgtcgtcgcagctcaaatcgtattgttgaagaagcaatgatcaccgctaacctc
tgcgcagctgctgtattaaaagaaaaattaggttttggcgtattcaacgtgcatatgggg
tttgaacctctgcaaattgaacaggttgtccaaacactcaaagaccatggtattgaaaca
actgctgagtctttgctatccctagaaggtttccgccaactacgtcgtcagttagatgca
caaccaacccaattccttgatagccgcatccgtcgttaccaaacctttgcagaggttaaa
gcggaccccggtccacactttggtttaggttttgatgcatatgccacatggacttcccca
atccggaaatataccgatattgttaaccatcggctattaaagtccatcattgcaggcaaa
ccttcacctgataaaccctcagaggaactatcaataaaactagccgaacgccgtcgtgcc
aaccgcatggcggaacgtgatgttggggactggttatattctcgatacttaaaaccattt
gcagggactgacacaaagttcccagcagaaatcattgatatcacccgtggcggtatacga
gttcggttagtggataatggcgcagtcgcatttgttcctgcaccgtttattcatagtgta
cgtgatgaaatccaatgtagccaagaaaccggggctgtactcattaaaggtgaacaagcc
tatcaattgaacgatattattaacgttactatcgcagaagttcgtatggaaacacgtaat
attgttgcacgcccagcagaataa
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