Providencia rettgeri: RB151_024430
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Entry
RB151_024430 CDS
T04571
Symbol
dapE_1
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
prg
Providencia rettgeri
Pathway
prg00300
Lysine biosynthesis
prg01100
Metabolic pathways
prg01120
Microbial metabolism in diverse environments
prg01230
Biosynthesis of amino acids
Module
prg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RB151_024430 (dapE_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prg01002
]
RB151_024430 (dapE_1)
Enzymes [BR:
prg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RB151_024430 (dapE_1)
Peptidases and inhibitors [BR:
prg01002
]
Metallo peptidases
Family M20
RB151_024430 (dapE_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
APC12114
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All DBs
Position
2643333..2644463
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AA seq
376 aa
AA seq
DB search
MDCPVIQLAKELIARPSISPDDQGCQALLIERLDKIGFLIEPMPFGNTLNFWAFRGAKGP
TLAFAGHTDVVPAGNSAQWQTPPFTPTIINQHLYGRGAADMKGSVAAMVVAAERFVEKHP
NHQGRLAFLITSDEEADALDGTVKVVETLMQRQERVDYCLVGEPSSQAQLGDIVKNGRRG
SITANLTIIGVQGHVAYPHLATNPVHRASAFLHELTTTTWDTGNDFFPATTMQIANIHAG
TGASNVIPGELSVQFNFRFSTELTDTQIRDRVTEMLSRHGLEYKIEWVLSGQPFLTEKRE
LVTATLQAIHELTGQNAELSTSGGTSDGRFIAQMGTQVIELGPLNATIHKVDECVKVDDL
QQLALIYERIMELLIL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggattgtccggttattcaacttgccaaagaacttattgctcgcccttcaatcagccct
gatgaccaaggctgccaagccttacttattgaacgcctagacaaaattggcttccttatt
gagcccatgccctttgggaatacattaaatttttgggcatttcgtggcgcaaaaggccct
actttagccttcgcaggtcacactgatgttgtccctgcgggtaatagtgctcagtggcaa
acaccaccatttacacctacgattataaatcagcatctttatggccgtggtgctgccgac
atgaagggttcagtcgcagcaatggtcgtcgctgcagagcgatttgttgaaaaacacccc
aaccatcagggtcgtttagcctttttaatcacctcagatgaagaggctgatgcgttagac
ggtactgttaaagtcgttgaaactttaatgcagcgccaagaacgcgtcgactactgttta
gtcggtgagccttctagtcaagctcaattaggtgacattgttaaaaatggtcgcagaggc
tcaatcacagctaacctcactatcatcggcgtacaaggccatgtcgcctacccacattta
gcaactaacccagttcaccgcgcaagtgcgtttttgcatgagcttacgaccaccacatgg
gatactggtaatgattttttcccagcaacgacgatgcaaattgctaacattcatgcaggg
acaggggcaagtaatgtgatccctggagaattatctgtccaatttaatttccgttttagt
actgagttgactgacacacaaatacgtgacagggtcactgaaatgttatcacgacatgga
ctcgagtataaaattgaatgggtactatctgggcaaccttttttgacagaaaaacgcgaa
ttagttaccgctacattacaagcaattcatgaattaacgggtcaaaacgctgaactttca
accagtggtggtacgtcggatggccgttttatcgctcaaatgggcactcaagtgattgaa
ctaggcccactaaatgcaacaattcataaagttgatgaatgcgtaaaagtggatgaccta
caacaattagctttaatctatgagaggatcatggagttgttaatactatga
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