Providencia rettgeri: RB151_025510
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Entry
RB151_025510 CDS
T04571
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
prg
Providencia rettgeri
Pathway
prg03030
DNA replication
prg03430
Mismatch repair
prg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RB151_025510 (holB)
03430 Mismatch repair
RB151_025510 (holB)
03440 Homologous recombination
RB151_025510 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prg03032
]
RB151_025510 (holB)
03400 DNA repair and recombination proteins [BR:
prg03400
]
RB151_025510 (holB)
Enzymes [BR:
prg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RB151_025510 (holB)
DNA replication proteins [BR:
prg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RB151_025510 (holB)
DNA repair and recombination proteins [BR:
prg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RB151_025510 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
NADH_4Fe-4S
Motif
Other DBs
NCBI-ProteinID:
APC12222
LinkDB
All DBs
Position
complement(2758859..2759851)
Genome browser
AA seq
330 aa
AA seq
DB search
MNWYPWLNEPYRQIIANYQSGRGHHALLLHSLPGNGADALCYGISRWLICQDREGLKSCG
KCHSCRLMLAGTHPDYHVIDVEKGKSTVSVDAVRKLIETLSSHSQQGGNKVVYIPRIEAF
TDAAANALLKTLEEPAKDTYFLLSSDKPENLLATTRSRCLSHFLPAPDPQIALYWLQKQQ
PNVVVDHAITALKLCQGAPVAALALLEEHLWQKRNALCQSISTALQTRDMLSLLPRLNIE
EASAALSWLLTLLSDAVKVQQGATTFCINQDHLAQVMQLASTMNRSQLLEAYEQWLHCRY
QLLTVPALNQELILTNQLLQWEALLASPSF
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaattggtatccttggttaaatgaaccttaccggcaaattatagcgaactatcaaagt
gggcgagggcaccatgccttactacttcattctttgcctggaaatggagccgatgcactt
tgctatggtattagtcgttggcttatttgccaagatcgtgaagggctgaaaagttgtggg
aagtgccatagctgcagattaatgctagcaggaacacaccccgattatcatgttattgac
gttgaaaaaggtaaatcaacggtcagtgttgatgctgttaggaaattaattgaaaccttg
agtagtcattctcaacaaggtggcaataaagtggtgtatattcctagaattgaagctttc
actgatgctgcggcgaatgcgttactaaaaacgctggaagagcctgcaaaagacacttat
tttctattaagtagtgacaaaccagagaatttacttgccacaactcgtagccgttgttta
agtcattttttgccagctcctgacccacaaattgctttgtattggttacaaaaacaacag
ccaaatgtagttgttgatcacgcaataaccgcattgaaactttgtcaaggtgctccagta
gccgctctggctctgttagaagaacatctttggcaaaaacggaatgcattatgccaaagt
atctctacagcattacaaacgcgggatatgctaagtttattgccacgattgaatattgaa
gaagcttcagctgccctaagttggttattaaccttactttccgatgcagttaaagtacag
caaggtgcgacaacgttttgtattaaccaagatcatcttgcacaagttatgcaattggcc
agtaccatgaaccgttctcaattattggaggcttatgaacagtggctacattgtcgttat
caattattgacagttcctgcgcttaatcaggaacttattctgaccaatcaattattacaa
tgggaagccttattggcttcaccttcattttaa
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