Providencia rettgeri: RB151_034550
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Entry
RB151_034550 CDS
T04571
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
prg
Providencia rettgeri
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prg03009
]
RB151_034550 (rimO)
Enzymes [BR:
prg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RB151_034550 (rimO)
Ribosome biogenesis [BR:
prg03009
]
Prokaryotic type
ribosomal protein modification factors
RB151_034550 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
NTPase_1
Methyltransf_2
YajR_YAM
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
APC13112
LinkDB
All DBs
Position
complement(3698444..3699778)
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AA seq
444 aa
AA seq
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MSQNTNSVPKIGFVSLGCPKNLVDSERILTELRTDGYQVVPSYDDADLVIVNTCGFIDSA
VQESLEAIGEALNENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEQVLNHVHHYVPK
PEHDPFFSLVPEQGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGDVLNEAK
RLVASGVKELLVISQDTSAYGVDVKHRTGFWDGQPVKTSMVGLCEQLASMGVWVRLHYVY
PYPHVDDVIPLMAEGKVLPYLDIPLQHASPKILKLMKRPGAVERTLERIKRWREVCPELT
LRSTFIVGFPGETEEDFQMLLDFLAEAKLDRVGCFKYSPVEGAKANELEDQVPEEIKEER
YHRFMQLQQQISTQRLQDKIDSTILVIIDEVDDEGAVGRSMADAPEIDGMVYLNGEFNVK
AGDIVKVKVEHADEYDLWGSIVTD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaatactaattcggtgcctaaaattggcttcgtttcccttggttgcccgaaa
aacctagttgattcagaacgtattttgactgagttacgcacagatggctaccaagtggtg
ccaagttacgatgatgcagatttagtcatcgtcaatacctgtggttttatcgatagcgca
gtacaagaatcgttagaggcgattggtgaggcgttaaacgaaaacggcaaagttatagtg
actgggtgcctcggcgcaaaagaaaatcaaattcgtgaagttcatccaaaagtcttagaa
atcacaggcccacatagctatgaacaagtactaaaccatgttcatcactatgtccctaaa
ccagaacatgaccctttctttagcttagttcccgaacaaggggttaaactaacgcctaaa
cattatgcttatttaaaaatttcggaagggtgcaatcatcgctgtactttttgtattatt
ccttcaatgagaggggatttagatagtcgtccaattggtgatgtattaaatgaagcgaag
cgtttagttgcatctggcgtaaaagaattactcgtgatttcacaagatacttctgcgtac
ggtgttgatgttaaacatagaacggggttttgggatgggcagccagtaaaaaccagcatg
gttggtttatgtgaacaacttgcttctatgggggtatgggtgcgtttacattatgtgtat
ccatatccacatgttgatgacgtgatcccattgatggctgaaggaaaagtattaccttat
ttggatatacctttgcaacatgctagtccaaaaatcctcaaattaatgaaacgtcctggg
gcagtggaaaggacattggaacggattaagcgttggcgagaagtttgccctgagttaacg
ttgcgttcgacttttattgttggctttccaggggaaaccgaggaagatttccaaatgcta
ttggatttcttagctgaagctaagctagatagagtcgggtgctttaaatatagcccagta
gaaggtgcgaaagcgaatgagcttgaggatcaagtacctgaagaaattaaagaagagcgc
taccatcgttttatgcaattacaacaacagatttcaacgcagcgtttacaagataaaatt
gacagtacaattttagtgattattgacgaagttgatgatgaaggggctgttgggcgtagt
atggcagatgcacctgaaatcgatggtatggtttatctaaatggtgagtttaatgttaag
gccggtgatattgttaaagttaaggtcgaacatgctgatgaatatgatttatggggctcg
atagttaccgattaa
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