Providencia rettgeri: RB151_035920
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Entry
RB151_035920 CDS
T04571
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
prg
Providencia rettgeri
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prg03021
]
RB151_035920 (rapA)
Transcription machinery [BR:
prg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
RB151_035920 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
COG2_N
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
APC13241
UniProt:
A0AAP2NV63
LinkDB
All DBs
Position
3852014..3854920
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGAVVAIDARMVTLLFPASGENRLYSRSDAPITRVMFNEGDT
ITSHEGWQLQVESIEEDKGLLTYIGTRLDTQEKDVSLREVFLDSKLTFNKPQDRLFAGQI
DRMDRFALRYRARKFQSEQVKHQATGLRGIRASLIPHQLHIANEVGKRHHPRVLLADEVG
LGKTIEAGMIIHQQLIAGRAERVLIIVPDSLQHQWLVEMLRRFNLRFSLFDDSRYSEAQH
DSDNPFETEQLVLCSLDFVRRSKQRFDQLVEAGWDMMVVDEAHHLQWSESAPSREYQVIE
TLAENVPSILLLTATPEQLGQESHFARLRLLDPSRFHDYQEFIAEQENYRPVADAVSLLL
SGEKLTNDQQNLLNELIKEQDIEPLLKAANVESEDGTAARQELINMLMDRHGTSRLLFRN
TRNGVKGFPRRELHSLKMPLPTQYQTAIKVAGIMGAKKDTETRAKEMLYPEQIYQEFEGE
NATWWNFDPRVEWLMGFLTANRHEKVLVICAKAATALQLEQVLREREGIRAAVFHEGLSL
LERDRAAAYFASEEEGAQVLLCSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRI
GQNRDITINVPYLENTAQSVLLRWYHEGLDAFEHTCPTGRAIYDKYYQPLLQFMADPTVT
DGFDEFIKTCREEHDSLKLQLEQGRDRLLEMHSNGGESGNQLAQEIGEGDNDTELVNFSL
NLFDIVGINQEDKSDNLIILTPSDHMLVPDFPGLPQDGCTITFDREQALSREDTQFISWE
HPIIRNGLDLVLSSDTGSCAVSLLKNKALPVGTLLTELIYVVEAQAPKHLQISRFLPATP
VRLLIDLKGNNLSSQVEFESFNRQLNAINRHMASKLVNAVQNEVHSVLRLSEPMVETEAK
ALIESAKEAADKALTLEFSRLEALKAVNPNIRDEELDIIEEERQQLITNIDQATWRLDAI
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccatttactcttggtcaacgctggatcagcgatacagaaagcgaacttggattaggt
gccgttgtggcgattgatgcccgtatggtcacgttacttttccctgcaagtggagaaaac
cgcctctactcacgcagcgatgcccctattacccgagtaatgtttaatgaaggtgatacc
ataactagccatgaaggctggcagcttcaagttgaaagcattgaagaagacaagggatta
ttaacttacatcggcactcgcttagatacacaagaaaaagatgtaagtcttagggaagtg
tttcttgacagtaagctcacgtttaataaaccgcaagaccgcttattcgctggccaaatt
gaccgtatggatcgctttgccttgcgttatcgtgcgcgtaaattccaaagtgagcaagtt
aagcaccaagcgacagggttacgtggcattcgagccagtttgatcccacaccaattacat
atcgcaaatgaagtgggtaaacgccaccaccctcgtgtgttattagccgatgaagttggc
ttaggaaaaaccatcgaagcagggatgattatccaccagcaattaatcgctgggcgtgct
gagcgtgtattaattattgtaccagatagcttacagcaccaatggttagtcgaaatgcta
cgccgctttaacctacgtttttctttatttgatgatagccgttatagcgaagcacaacac
gatagtgataacccatttgaaactgaacaactggtgctttgttcactcgatttcgtgcgt
cgcagtaagcaacgctttgaccaactcgttgaagctggctgggatatgatggttgttgat
gaagcacaccacttacagtggagtgaatcagcccctagtcgtgaatatcaggttattgaa
acattagctgaaaatgttccttctattctgctacttaccgccacacctgaacaactaggc
caagaaagccactttgcgcgtttacgtttgctggaccctagccgtttccatgactatcaa
gaatttattgcagaacaagaaaattatcgccctgttgccgatgccgtttcattactgctc
tctggtgaaaaactgacaaacgaccagcaaaacttgctcaatgaattaattaaagagcaa
gacatcgaaccgctattaaaagcggcaaatgttgagagtgaagatggtacggctgcgcgc
caagagctaattaacatgttaatggaccgtcatgggactagccggctgctatttcgcaat
acgcgtaacggagtaaaaggctttcctcgccgcgaattgcattctttaaaaatgccattg
ccaacccaataccaaacagcgattaaagttgcaggtattatgggagcaaaaaaagacacc
gaaacacgcgccaaagaaatgctttatccagagcaaatctaccaagaatttgaaggtgaa
aatgcaacttggtggaacttcgatccacgcgttgaatggttgatgggctttttaaccgct
aaccgccatgaaaaagtattagtaatctgcgcgaaagctgcaaccgcacttcaattagaa
caagtcttacgcgaacgcgaaggtatccgtgcagccgtattccatgaagggttatcacta
ttagagcgcgaccgtgcagcagcttactttgcttccgaagaagaaggcgcacaagtgtta
ctctgctctgaaattggttctgaaggccgcaatttccaatttgcaaaccaattagtgatg
tttgatttacccttcaacccggacctcttagaacagcgtatcggccgcttagataggatt
ggccaaaaccgtgatatcaccatcaacgtcccgtatttagaaaatacggcacaatccgtt
ctactgcgctggtatcacgagggtttagatgcctttgagcatacctgcccaacgggtcga
gcaatttacgataagtactatcagccattattacaatttatggccgacccaacggtaacc
gacggtttcgatgagtttatcaaaacctgtcgtgaagaacatgacagcttaaaattacaa
ttggaacaagggcgcgaccgtttactggaaatgcattctaacggcggggagtctggtaac
caattggctcaagaaattggtgaaggtgataatgacactgaattagtcaatttctcacta
aacttatttgatatcgttggaattaaccaagaagataagagtgataacttaattattctg
acgccttctgaccatatgttagtccctgatttccctggccttcctcaagatggctgtacc
attacttttgatagggaacaggcactttcacgcgaagatacgcaatttatcagttgggag
cacccaattatccgtaacggcttggatttagtgttatccagcgatacaggtagctgcgcg
gtttctttattaaaaaataaagctctccccgtaggtactttgctgacagagttaatttac
gttgtggaagctcaagcgcctaagcacctgcaaattagccgtttcttacccgctacgcct
gtgcgtttattaattgacctaaaaggcaataacttatcgtctcaagttgagtttgaaagt
tttaaccgtcaattaaatgcgattaaccgccatatggcgagcaaattggtcaatgcggtg
caaaatgaagtgcattctgtactgcgtttatctgaacctatggtggaaacagaagccaaa
gccttgatagagagcgctaaagaagccgccgacaaagcactaacgttggagttttctcgt
ttagaagcccttaaagcggttaaccctaatattcgtgatgaagaactggatattatcgag
gaagagcgccaacaactgatcactaatattgaccaagcaacatggcgtttagatgctatt
cgcttagttgtggtgacgcatcagtaa
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