Providencia rettgeri: RB151_038630
Help
Entry
RB151_038630 CDS
T04571
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
prg
Providencia rettgeri
Pathway
prg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RB151_038630 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prg03019
]
RB151_038630 (groL)
03110 Chaperones and folding catalysts [BR:
prg03110
]
RB151_038630 (groL)
03029 Mitochondrial biogenesis [BR:
prg03029
]
RB151_038630 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prg04147
]
RB151_038630 (groL)
Enzymes [BR:
prg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RB151_038630 (groL)
Messenger RNA biogenesis [BR:
prg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RB151_038630 (groL)
Chaperones and folding catalysts [BR:
prg03110
]
Heat shock proteins
HSP60 / Chaperonin
RB151_038630 (groL)
Mitochondrial biogenesis [BR:
prg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RB151_038630 (groL)
Exosome [BR:
prg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RB151_038630 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RB151_038630 (groL)
Exosomal proteins of breast cancer cells
RB151_038630 (groL)
Exosomal proteins of colorectal cancer cells
RB151_038630 (groL)
Exosomal proteins of bladder cancer cells
RB151_038630 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
APC13511
UniProt:
A0A1J0EC49
LinkDB
All DBs
Position
complement(4142870..4144513)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGSDARTKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGSPVITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKTLSVPCSDSKSIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEEG
TGLEDELDVVEGMQFDRGYLSPYFINKPETGAVELENPFILLVDKKVSNIRELLPVLEGV
AKASKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTNGTV
ISEEIGMELEKATLEDLGQAKRIVINKDTTTIIDGVGDEATISGRVAQIRQQIEESSSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKRARVDDALHATRAAVEEGVVAGGGTALV
RVAAKLEGLKGDNEDQTVGIRVALRAMESPMRQIVTNAGEEASVVVNKVKSGQGNEGYNA
ATDAYGDMIDMGILDPTKVTRSALQFAASIAGLMITTEAMITELPKSDAPDLGAAGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgttaaatttggtagtgatgcacgtacgaaaatgcttcgtggtgtg
aatgttctggcagatgcagtaaaagtaactttaggtcctaaaggccgtaatgtagtttta
gataaatctttcggctcaccagttatcaccaaagatggtgtttctgtagcacgtgaaatc
gaattagaagataaattcgaaaacatgggtgcacagatggtgaaagaagttgcctctaaa
gctaacgatgctgcgggtgacggtacaactacagcaacagttttggctcaagctatcatc
actgaaggtttaaaagccgttgcagcgggtatgaacccaatggatcttaaacgtggtatc
gataaagccgttattgctgcagttgaagagctgaaaacactttctgttccatgttcagac
tctaaatcaatcgcacaggttggtactatttctgcaaactccgacgaaaccgtgggtaaa
ctgatcgcagaagcaatggataaagtcggtaaagaaggcgttatcactgttgaagaaggt
acaggcctagaagatgaattggatgtggttgaaggtatgcagtttgaccgcggttacctg
tccccttatttcatcaacaaaccagaaacaggtgctgttgagttagaaaacccatttatt
ttattagttgataaaaaagtttctaacatccgtgaattactgcctgtattagaaggcgta
gctaaagctagcaaaccactgttaattattgcagaagatgttgaaggcgaagcgctggca
acactagttgtcaacacgatgcgtggtattgttaaagttgcggctgttaaagctcctggc
tttggtgatcgtcgtaaagcaatgctacaggatatcgctgttctgactaacggtactgtt
atctctgaagagatcggtatggagctagaaaaagcaacgttagaagacttaggtcaagca
aaacgcattgttatcaacaaagatactacaaccattattgatggtgttggtgatgaagcg
acgatttcaggccgtgttgctcaaattcgtcagcaaatcgaagagtcttcttctgattat
gaccgtgaaaaattacaagagcgtgttgctaaattagcaggcggtgttgctgttattaaa
gttggtgcagcaactgaagttgaaatgaaagaaaaacgtgctcgcgttgacgatgctctg
catgcaactcgcgcagctgttgaagaaggtgttgtagctggtggtggtactgcactggtt
cgtgttgctgctaaactggaaggtttaaaaggcgacaacgaagatcaaaccgtgggtatc
cgtgttgctctgcgcgcaatggaatcacctatgcgccaaatcgtgactaacgcaggcgaa
gaagcctctgttgttgtgaataaagttaaatcaggccaaggcaacgaaggttataacgca
gcgactgatgcatacggcgatatgatcgatatgggtatcttagacccaactaaagtaacg
cgttctgctctgcaatttgcagcatctatcgcaggtttaatgatcacgacagaagcgatg
atcactgaactgccaaaatcagatgcacctgacttaggtgctgctggtatgggcggcatg
ggtggaatgggcggcatgatgtaa
DBGET
integrated database retrieval system
