Providencia rettgeri: RB151_041030
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Entry
RB151_041030 CDS
T04571
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
prg
Providencia rettgeri
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prg03016
]
RB151_041030 (truB)
Enzymes [BR:
prg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RB151_041030 (truB)
Transfer RNA biogenesis [BR:
prg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RB151_041030 (truB)
Prokaryotic type
RB151_041030 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
APC13749
LinkDB
All DBs
Position
complement(4398041..4398994)
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AA seq
317 aa
AA seq
DB search
MGRRRSGRDIDGVVLLDKPTDISSNDALQKVRRFFNANKAGHTGALDPLATGMLPVCLGE
ATKFSQFLLDSDKRYRVVARLGQRTDTSDSHGEIISERNVEFTPQQLDDALAFFRGDTLQ
VPSMYSALKHQGRPLYEYARKGITVEREARPITVYELQFIRLENNELELEIHCSKGTYIR
TIVDDLGEMLGCGAHVIYLRRIQVANYPYERMVTLEQLAALRAQVDAGEGSFESLLDSLL
LPMDTAVVHFPAINITEETAAYFKQGQPVRANVEGLIEGDMVRVTCGEEQRFIGIALISE
DGRVAPKRLVVENEQSA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtcgtcgtagcggccgtgatatcgacggtgtagtgctgctggataaacctacg
gatatttcttctaatgatgcgctgcaaaaagtgcggcgcttttttaatgctaataaagct
gggcatacaggggcgcttgatccgttagcaacaggtatgttgcccgtttgccttggtgaa
gcaacgaagttttcccaatttttactcgattcagataagcgttatcgtgtagtagctcgt
ttaggtcaacgtactgatacatcggattctcatggcgaaatcatcagcgagcgtaacgtt
gagtttacgccgcaacagttagatgacgccttagcgtttttccgaggcgatacactgcaa
gtaccttcgatgtattccgcattaaaacaccaaggtcgtccattgtatgaatatgcacgt
aaagggattacggttgagcgtgaagcccgcccaattactgtgtatgaactacagtttatt
cgtttagaaaataatgagttagaactggaaattcattgctcgaaagggacttatattcgt
actattgttgatgatttaggcgaaatgttaggctgtggcgctcatgtgatttatctacgg
cgtattcaagtcgctaattacccatatgagcgcatggtaacattagagcaattagccgct
ttgcgggcacaagtagatgcaggagaaggttcttttgaatcattactggatagcttgtta
ttgccaatggataccgcagttgttcattttccagctatcaatataactgaagaaacagcg
gcttactttaaacagggtcaacctgttagggcgaatgttgaaggtctcattgaaggggac
atggtccgagtgacttgcggtgaagagcagcgttttatcggtattgctctgattagcgaa
gatggccgtgtggcaccaaagcgtttggttgtggaaaatgaacaatccgcatag
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