Providencia rettgeri: RB151_041900
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Entry
RB151_041900 CDS
T04571
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
prg
Providencia rettgeri
Pathway
prg03420
Nucleotide excision repair
prg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RB151_041900 (uvrD)
03430 Mismatch repair
RB151_041900 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prg03400
]
RB151_041900 (uvrD)
Enzymes [BR:
prg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RB151_041900 (uvrD)
DNA repair and recombination proteins [BR:
prg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RB151_041900 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
RB151_041900 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APC13831
UniProt:
A0A1J0ED21
LinkDB
All DBs
Position
complement(4490834..4492996)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLEGLNDKQREAVAAPRTNLLVLAGAGSGKTRVLVHRIAWLMSVENASPFSIMAV
TFTNKAAAEMRHRINQLIGSSEGGMWIGTFHGLAHRLLRQHYMDANLPQDFQILDSDDQY
RLIRRLLKAMNLDEKQWPPRQGMWYINGKKDEGLRPQHIESYGNPVEATWLKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHVLQHYRERFTNILVDEFQDTNNIQYAWIRVLAGET
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTNNILKAANALIANN
SDRLGKNLWTEGGDGEPISLYCAFNELDEARYIVGRIKQWQENGGALKDCAMLYRSNAQS
RVLEEALIQTNMPYRIYGGQRFFERQEIKDALSYLRLIANRNDDASFERVVNTPTRGIGE
RTLDTVRQTARDQQLTLWESCEYLLREQVLGGRAAAAIERFLELVEALAKETQDMPLHVQ
ADRVIHDSGLRAMYEQEKGEKAQARIENLEELVNATRDFSYQEEDQDLMPLQAFLSHAAL
ESGEGQADANQDAVQLMTLHSAKGLEFPVVFIVGMEEGMFPSQMSMDESGRLEEERRLAY
VGVTRAMEKLTITYAESRRLYGKEVYHRPSRFIGELPTECVEEVRLRATVSRPVSHQRLG
TPISQNDSGYALGQRVMHPKFGEGTIINLEGSGEHCRLQIAFQGQGIKWLVASYARLENL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctcttatctgcttgaaggtctcaatgacaaacaacgcgaagcggttgccgca
ccgcgtactaatttacttgtgctcgcgggggcgggcagtggtaaaactcgcgtattggta
caccgaattgcctggttaatgtcggtggaaaatgcatcaccattttctattatggcagtg
acgtttactaacaaagcagcggcagaaatgcgccatcgaatcaatcagttgattggcagt
agtgaaggtgggatgtggattggcacattccatggtttagcacaccgcttgttgcgccaa
cattatatggatgccaatttaccgcaggattttcaaatcttagatagtgatgaccaatat
cgcttaattcgacgtttgcttaaagcaatgaatttagatgaaaaacaatggcccccacgt
caaggaatgtggtacatcaacggcaaaaaagatgaaggtttacggccccaacatattgaa
agctatggtaaccctgttgaagcgacgtggttgaaagtatatcaggcgtatcaagaggct
tgtgatagagcaggtttggtcgatttcgctgagctgttacttcgagctcatgaattgtgg
ttgaataaaccccatgtattacaacactaccgtgaacgttttactaatattttagtggat
gaattccaagatactaataatattcaatatgcatggattcgagtattagcaggggaaaca
ggcaaggtcatgattgttggtgatgacgatcaatcaatttatggctggcgtggtgcccaa
gtagagaatatccaacggtttcttaatgatttccccggtgcagaaacaattcgtcttgag
caaaactatcgctcgacaaataatatattaaaagcggcgaatgctttaattgcgaataac
agtgatcggctaggcaagaatttatggacagaaggaggggatggtgaacccatttcactc
tactgtgcatttaatgaattagatgaagcccgctatattgttgggcgtattaaacaatgg
caagaaaatggcggggcgttaaaagattgtgccatgttatatcgtagtaatgcccaatcg
cgtgtacttgaagaggcgttaattcaaactaacatgccttatcgcatatatggcggccaa
cggttctttgaacgtcaggaaatcaaagatgcactttcttatttaagactgatagcaaat
cgtaatgatgatgcctcgtttgaacgcgtggtcaacacgccaacacgaggaataggtgaa
cgtactttggataccgttcgccaaacagcacgagatcaacaattaactttatgggaaagt
tgtgagtacttacttcgtgagcaagtacttggagggcgagctgcggcagcaatagagcgt
tttttagagttagttgaagcgttggcgaaagaaacgcaagatatgccattgcatgttcaa
gcagatagggttattcacgattctggtttgcgtgcaatgtatgagcaggaaaaaggcgaa
aaagcccaagcgcgtatcgaaaacttggaagagttggtgaatgcaacgcgtgactttagc
taccaagaagaagaccaagatttaatgccattacaggcatttctatcacatgcagctctt
gaatcaggggaagggcaagcggatgccaaccaagatgctgttcaattgatgactttgcat
tcagccaaaggtttggaattcccagttgtattcattgtcggaatggaagaagggatgttt
cccagccaaatgtcaatggatgaaagcgggcgtcttgaagaagagcgtcggctcgcttat
gtgggggttacccgagcaatggaaaaacttaccattacttatgcagaaagtcgtcggtta
tacggtaaagaagtctatcaccgtccatcacgctttattggtgagctaccgactgaatgt
gtcgaagaagttcgcctaagagccacagtttctcgtccggttagccatcaacgccttggt
acaccaatcagtcaaaatgattcaggttatgcgctaggccagcgggtaatgcaccctaaa
tttggtgaggggactattattaacctagaaggcagcggtgaacattgtcgtttacagata
gcctttcaaggacaagggattaaatggctagtggcttcatatgcacggctagagaattta
tag
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