Providencia rettgeri: RB151_041940
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Entry
RB151_041940 CDS
T04571
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
prg
Providencia rettgeri
Pathway
prg00300
Lysine biosynthesis
prg00470
D-Amino acid metabolism
prg01100
Metabolic pathways
prg01110
Biosynthesis of secondary metabolites
prg01120
Microbial metabolism in diverse environments
prg01230
Biosynthesis of amino acids
Module
prg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RB151_041940 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RB151_041940 (dapF)
Enzymes [BR:
prg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RB151_041940 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
APC13835
UniProt:
A0A1J0ECX7
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All DBs
Position
complement(4495588..4496412)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDGVTQNVYFSPELICRLADRHTGVGFDQLLLVEAPYDPDLDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKQKIKVSTQSGRMTLTINENDDVCVNMGE
PDFEPQRVPFRAIKEEKTYIIRAQERTVLCGVVSMGNPHCVIQVESIHTAEVEILGPALE
SHERFPERANIGFMEIINAEHIRLRVYERGAGETQACGSGACAAVAVGITQGLLAKRVRV
DLPGGSLNITWEGPGAPLYMTGPATHVYDGVIQL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctctaaaatgcatggcttaggcaatgacttcatggttgtcgatggtgtcaca
caaaatgtgtatttttcgccagaacttatttgccggctggcagataggcatactggtgtc
ggttttgatcagctattattagttgaagccccctatgaccctgaccttgactttcattat
cgcatttttaatgcggatggcagtgaggtgtcacaatgtggtaatggggcgcgttgtttt
gcgcgttttgttcggcttaaaggtctgactaataagcaaaaaattaaagttagtacccaa
tcaggccggatgacattaaccataaatgaaaatgatgatgtctgcgttaatatgggagag
cctgattttgagcctcaaagggtgccatttcgcgctattaaagaagaaaaaacctatatt
attcgagctcaagaacgtacagtgttatgtggggttgtttcaatgggtaacccacattgc
gtcattcaggttgaaagtattcataccgcagaggttgaaattttagggccagctttagag
agccatgagcgctttcccgaacgcgctaatattggtttcatggaaattattaatgctgag
catattcgcttgcgcgtttatgagcgtggtgcaggtgaaactcaagcatgtggtagtgga
gcatgtgccgcagtggctgttgggatcactcaagggttattggcgaaacgagtacgtgtt
gatttacccggcgggtcgttaaatataacttgggaaggcccaggggctccgttgtatatg
acaggcccagcaactcatgtctacgatggggtcatccagctataa
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