Pseudomonas rhizosphaerae: LT40_01175
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Entry
LT40_01175 CDS
T03339
Name
(GenBank) hypothetical protein
Organism
prh
Pseudomonas rhizosphaerae
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ToxA_N
HeLo
Motif
Other DBs
NCBI-ProteinID:
AIS16087
UniProt:
A0A089YP08
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All DBs
Position
complement(249682..254973)
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AA seq
1763 aa
AA seq
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MSDANTLFVSRPLPYRAYPMRHDNLVQEGSLLWERARTRLQALLAQVPRAIDPLPPPAAL
AEQTLEEQHKQRWINYWNGRAPHTSASRRVAAEQSFLDHLQAAAQLAYYHGQLTHAQLLP
LLRLLEGAGDSETQPVLVETVALKPGEGTKLRAVGALVITADSAAQLLYLPTQNPALRAF
ADRQALQTDLLRNRSGVFQSTTLPVDTAVELSYQTARLSSACKQWLSHCRHGYLEAARAS
TPCNGEEACAATTATRQPPCQVPFATLPAFQTPEPTENADNFAAFGSLSPDIPQSHRWAE
LKRQHQAMLNLLADDLRAGTDSPGWVRLKALFAALTHAQTRASQAAAGLLAADKLEDLYR
LRYLPNAHYSALYQARLDGVRAEVALQEALGLLSLPQVQLMQAMLSNPQASKRKAEHGIA
CAVSLSFTRASDAASTTQVQQLHGVVAFMPANALAGEGFVLAYWPGLGGGLEPFESLAHL
KRTLFRLSADTDTVALQLSPITGDFFDHGLQGQLHACEEQASGLIERLPSATHSRERLES
LQQLTAQTYEHLLVPAHAARDRAYVQLAQEGFSESLTAGSPSWLKALGMDDRQRLKSLIS
DYIRAARASNSQLERDLPDLGQFANARLQQRLQSDFKLTDGVDVLIDIPDRLIQRKHPVA
GSGAPGTPQQTTATAGPTWTSWPLANLAQHNIDADLLQRLGFMRVQVTGADAEQRGRVLA
GIDLSYVRKTVTDLNLAQACEDKIRQAFLGSASQHPYANAHQRECLLEPVRLMLHLQSEY
ARHQGRISASGYRLAVLATDASNAAAFKSDGRDVQLLPARLMVGGRDTDDRPTTLSGVTF
VHDRNGGQTLLYLPDAPDHRCLREYPSLAAARLGLFDLTLDGKVVDYLANRAISGSPASH
KARIEQAGLRRFDGLIGVGHPWPATTSMASHLLDAYMGQLIEAQRRRGRSNDALYLEQAA
LSHGNVFDYLKMAFGMLPFVGTALALYDAWAAANAAVGALRTGAFGEGLNQLEAMLAALI
DAAIDIVPGAVSAPGGGLLTRGRQWSMLARRAGAPVATKQAMAGGSNPFAGYQYRLPLDL
SELKPATQGLYRAVYRHADGDFILRDGQPYRVTLHSSPQTWRLHGTASKSYAQPIALDPT
GRWQTHGALYGTLIKDGLAGGGGVLGYLGHRAADGLQPLWPAAIRERLPRWLVDRQYRRH
FELSSSIEHGNKVLREQLNLNESLIMEHAADPQRRPSAEAACASDIERAEALYVLLQEHE
VHVSRDFLRRNKQFQSEVAYIVAGRRINQAKLAGRWINELTETLNQPRAPGELFDLPLSQ
MLEQRRTRLTLDQQYGFMEQRLQHARTWADRVTLRSDRAHLREVLDAVGAADLEIARASN
LTQLAHETADVSKISDMFHLLDTQAMRNRFHHGLESHLRLSETTAGLRDRQSVLLSSRQI
YVDYRKQLNTWIRNRPDRFDPEAFERLIQSLDRLIDHVDKTMPHLSSVSRKPKQPGSATR
RVFETHEHDFFIGEESRKADGEQIFTLTGTGGRLETYRRAGGQWRLQDAPQPGPSQPLAE
LLAEGRKWLDASAAHERRVESYAVPGEAPANLQDLMVNQGKQLELRAAAIEQQQPSNELV
QRLRVRAEELRAKGRALRIRQAMSSQTPTEGYLDYLLEQRQVDIVKVGDRIPIGTARAEA
DFLQEYVIRDISVQPPVSLWYAHFHYGRERAAFEQFDKAHIKRPEQRMLGLRWQKEHGPE
AQRIWRGPIGKPLAKKHFEGVQA
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgccaataccctcttcgtttcacgccccctgccgtaccgtgcctacccgatg
cgccatgacaacctggtgcaggaaggctcactgctctgggagcgcgcacgtacacgcctg
caggcgctgctggcgcaagtaccgcgtgcgatcgatcctctgccgccgcctgctgcactg
gccgaacagacgctcgaagagcagcacaaacagcgctggatcaactattggaacggccgt
gcgccgcacacgtcagcctcgcgtcgcgttgcagccgaacagtcgtttctcgatcacctg
caagcggctgcgcagctggcctactaccatggccaactgacccacgcccaactgctgccg
ctgctgaggctgctcgaaggcgctggcgacagcgaaacgcaaccggtcctggtcgagacg
gttgcgctgaagcctggcgaaggtaccaagctgagggcagtcggcgccttggtcataacg
gcagacagcgctgcgcaactgctctatctacccacgcagaacccggcgctgcgggccttc
gccgatcgccaggcgttgcagaccgacctgttgcgcaaccgctctggcgtgtttcaaagc
acaacgctgcccgtcgatacggccgtcgaactgagctaccaaaccgcacgactttccagt
gcctgcaagcagtggctgagccattgccgccatgggtacctggaagccgcgcgcgcatcc
acgccctgcaatggcgaggaggcctgcgcagccaccacggcaacccgccagcccccatgc
caggtgcccttcgccaccctgcccgccttccagacgcctgagccgacagaaaacgccgac
aattttgcagcgttcggcagcctgagtccggacattccacagagccatcgctgggccgaa
ctcaagcgtcagcatcaggcaatgctgaacctgctcgcagacgacctgcgggcaggcacc
gacagccctgggtgggtgcgtctgaaagccctgttcgcggccttgacccatgcccagacg
cgcgcttcacaggctgcagccggtctgttggcggccgacaagctggaagatctgtatcgc
ttgcgatatctgcccaatgcgcactattcggccctgtaccaggcacgcttggacggcgtg
cgcgccgaagtcgccctgcaggaagcgctgggcctgttaagccttcctcaagtgcagttg
atgcaggcgatgctgtcgaatcctcaagccagcaagcgcaaagccgaacacggcatcgcc
tgcgcagtgtcactttccttcacccgcgcgagcgacgccgccagcacgactcaggttcag
caattgcacggcgtggtcgcattcatgccggcgaatgccctggcaggtgaaggtttcgtt
ctggcctattggccagggctaggcggtggtctggagccgttcgaatcgctggctcacctc
aaacgcacgctgtttcggctgagcgccgacaccgacaccgttgccttgcaactgtccccc
atcaccggagatttcttcgaccacggccttcagggtcaactgcacgcttgcgaggaacag
gccagcggactcatcgagcgtctgccctcggccacccattcgcgagagcgtctggaaagc
ttgcagcaactgacggcgcagacctacgagcacctgctggtgcccgctcatgccgcgcgc
gacagggcctacgtgcagctggcccaggaaggcttcagtgaaagcctgaccgctggctcg
ccgagttggttgaaggcacttggaatggacgatcgtcagcgcctgaagtcgttgatcagc
gattacatccgcgcggcgcgcgcctccaactcgcaactggaacgcgacctcccggacctg
gggcagtttgccaacgcacggcttcagcaacggctgcaaagcgatttcaagctgaccgat
ggggtggatgtactgatcgacattcccgaccgactcatccagcgcaaacacccggtggcc
ggttccggcgcgccgggcacaccgcagcagaccacggccacagccggccccacgtggacg
tcttggccgctcgccaacctggcccagcacaatatcgatgccgacctgctgcagcgcctg
ggcttcatgcgcgttcaggtaaccggcgccgacgccgaacaacgtgggcgggtgttggcc
ggtatcgacctgagctatgtgcgcaaaacagtcaccgacctcaaccttgcacaagcctgt
gaagacaagattcgccaggcctttctcggcagtgccagccagcacccgtacgccaacgcc
catcaacgcgaatgcctgctcgaacccgtgcgtctgatgttgcacctacagagtgaatac
gcccggcaccaaggccggatcagtgccagcggttaccgcctggcagtgctcgccaccgat
gccagcaacgccgcagctttcaaatcggatggccgcgatgtgcagttgctgccggcgcgc
ctgatggtcggcggccgcgataccgacgaccgccccaccaccctgtccggcgtgaccttc
gttcacgaccgcaacggcggccagaccctgctctacctgccggacgctcccgaccatcgc
tgcctgcgcgaataccccagccttgcggccgcacgcctgggactattcgacttgaccctg
gacggcaaggtggtcgactacctggccaatcgagcgattagcggcagccccgccagccac
aaggcccgcatcgagcaggcagggctgcgtcggttcgacgggctgatcggcgtcggccac
ccgtggccggccacgacctcgatggccagccacctgctcgatgcgtacatgggtcaactc
atcgaagcccaacgtcggcgtggccgcagcaacgatgccctgtacctggagcaggcggca
ctgtcccacggcaatgtgttcgactacctgaaaatggcgttcggcatgctaccgttcgtg
ggcactgcactggccttgtatgacgcctgggcagccgccaacgccgcagtcggcgcactg
cgcaccggtgcgttcggtgaagggctgaaccagctcgaagccatgctcgcggcactgatc
gatgcggccatcgatatcgtgcccggggctgtgtccgcgcccggcggcgggttgctgacc
cgcggtcgccagtggtcgatgctggcacggcgcgcaggtgcacccgtcgcgacgaaacaa
gccatggccggcggctcgaacccctttgccggctatcaatacaggttgccattggacctg
agcgagctgaaaccggccacccagggtctgtaccgtgctgtctatcgccatgccgacggc
gatttcatcctgcgcgacggtcagccctaccgtgtcacccttcactccagcccgcagacc
tggcgcctgcacggcaccgccagcaagagctatgcccagcccatcgccctggatccgacc
gggcgctggcaaacccacggtgcgctgtatggcacgctgatcaaggacggcctggccggc
ggcggtggcgtcctgggctacctgggccatcgcgccgccgatggcctgcaaccgctctgg
cctgccgccatccgcgagcgcctgccgcgctggctggtggatcgccagtaccgtcgccac
ttcgaactctccagcagtatcgagcatggaaacaaggtactgcgcgagcagttgaacctt
aatgaatcgttgatcatggaacatgctgccgacccacagcggcgccccagtgccgaagcg
gcctgcgccagtgacatcgagcgggccgaagcgctgtacgtgctgctgcaggaacatgag
gtgcatgtgtctcgcgactttctcaggcgtaacaagcagttccagagcgaagtggcctac
atcgtcgctggccgtaggatcaaccaggccaaactggccggacgctggatcaacgagctg
accgaaacgctcaaccagccccgcgcgcccggcgagctgttcgatctgcctctttcgcaa
atgctcgaacagcgtcgcacacgcctgaccctggatcagcaatacggttttatggagcag
cgcctgcagcacgcacgaacgtgggccgatcgggtcaccctgcgcagcgatcgtgcccac
ctgcgtgaggtgttggacgctgtgggtgcagctgacctggagattgcccgcgcctcgaac
ctgactcagttggcacacgaaaccgcagacgtcagcaaaatctcggacatgttccacctg
ctcgatacccaggccatgcgcaaccgctttcaccacggtctggaaagtcacttgcgcttg
tcggagaccacggccgggttgcgcgaccggcaaagcgtgctgctcagttcacgacagatc
tatgtcgactaccgcaagcagctgaacacctggatacgcaaccgcccggatcgcttcgac
cccgaggcgttcgagcggctcatccagtccctggatcggctcatcgaccacgtggacaaa
accatgccgcacctgagtagcgtctcccgcaagcccaagcagcctggctctgccacccgc
cgggtgttcgaaacccacgagcatgactttttcatcggcgaggaaagccgcaaggcagac
ggcgagcagatattcacccttacaggcaccggcggcaggcttgaaacctaccgacgcgca
ggcggccaatggcgcctgcaggacgcgccgcagccagggccttcgcagcccctggccgaa
ctgctcgccgaaggtcgaaaatggctggatgccagcgctgcccatgaacgccgagtggaa
agttatgcagtgccgggcgaggcgccggcgaacctgcaagacctgatggtcaaccagggc
aaacaactggaattgcgcgccgcagccatcgagcagcagcaaccctcgaatgagctggta
caacgtctgcgcgtgcgtgccgaggagctgcgggccaaaggtcgagccctgcgtatccga
caggcgatgagcagccagacgccaaccgaagggtacctggactatcttctggagcagcgc
caagtggacatcgtcaaggtgggagatcgcatccccatcggtaccgcacgcgccgaagcc
gattttcttcaggagtacgtgattcgcgatatcagcgtccagccgcccgtttcgctgtgg
tatgcccacttccactatggccgggaacgggccgccttcgagcaattcgacaaggcgcac
atcaagcgcccggagcaacgcatgctcggcttgcgctggcaaaaggagcacggccccgag
gcgcaacgcatctggcgcgggcctatcggcaagccgttggccaagaaacacttcgagggg
gtgcaggcgtaa
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integrated database retrieval system
