Pseudomonas rhizosphaerae: LT40_01760
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Entry
LT40_01760 CDS
T03339
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
prh
Pseudomonas rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prh03400
]
LT40_01760
DNA repair and recombination proteins [BR:
prh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LT40_01760
Archaeal homologous recombinant proteins
LT40_01760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
AAA_15
ABC_tran
nSTAND3
RsgA_GTPase
AAA_22
cobW
Motif
Other DBs
NCBI-ProteinID:
AIS16190
UniProt:
A0A089YR51
LinkDB
All DBs
Position
complement(371620..375252)
Genome browser
AA seq
1210 aa
AA seq
DB search
MKILAIRLKNLASLAGPFELDFTAEPLVSAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LGNASQSAKVPDADGEIGSYDPRTLLRRGTGAGYAEVDFLGVDGRRYRARWEANRARDKP
AGKLQNSRQSLRDLDNDQLLASQKGEYKQLLEARLGLNFEQFTRAVMLAQSEFSAFLKAD
DNERSELLEKLTDTALYTRLGKRAFEKSRDAREQLKHWQDQATGIAPLAAEAREALDLEF
HTASEQLRQHQAHLKQVEQQQQWHCEDRRLSDDCQAARQQVQDASQAWEAGAEQRLQLHM
LEQLAPQRHLFSRQHELQTQLQPLAERIEQARAQQVQQQVQREQLDVQREQTGHQLQQAL
AQQAEAQPLLQQAFDAQSNRGRLHTEIEPLRPALAEAERQLSAGQQALHVMEQQQAGSGE
RLQQVAEALERSAELAPLAGTWGAYLPRLQQVVTLSSRLRQGQAELPALQTQAHTTRTSL
AEHESDLARVFQNAPCSAEQLPERVQQLTQRLQQQHQELRAVQELERLWQRRSAIEERLE
QGRQQQASLLARREQLTAQGLEVRAAHEQAEQALKVTLQLLERQRLARSESVEQLRERLQ
PEQPCPVCGSVEHPYHAPEALLQALSAHDDDEEQRARAALKPVSERLVELRTEVGALIEQ
HKQLKAQEQQWLDQPGDAELARHPLYPALCDAEQPADWLCDTLAGHTRSIDEDERQQNSL
LALQQQASALQRAVAQAREASQQAQQLLQAHQAHLDADQQRLDEELQALASQLPAARLQA
LREHPAQTFMALEQSIGERLAQIEQRDEEQGEFDARARRIEQARSEHARHQTDCEQQRQR
VQALSAQLQTCEARLRELLGEHAQASAWQTALHDQVEMARDQERQTDRQQQDLRTRTVQT
ASALEADTAQQAQLQQTLADVEQALHAWREQRPQLEDDGLQALLAIDEPQVDELRSRLQS
TEKALEQARIRLHEREQRQQSHRTQVDAIASVEALDAQHAALLMDVERQEHHCAELRARQ
AEDQRRHSANHALQTQIAEADAHYQRWARLAALIGSAEGDRFRKIAQAYNLDLLVHHANV
QLRQLVRRYRLKRGGSMLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASMASST
LRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQVRRLG
NGLSSVEVSG
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctggccatccgcctgaagaacctcgcctcgctggcaggcccgttcgaactg
gacttcaccgccgaaccgctggtcagcgccggtctgttcgccatcaccggccctaccggc
gcgggcaagagcaccctgctcgacgccctgtgcctggcgctgttcggcgccgtaccgcgc
ctgggcaatgcgtcgcagagtgccaaggtgcccgacgccgacggtgaaatcggcagctac
gatccgcgcaccctgttgcgtcggggtaccggggcgggctatgcggaagtggacttcctc
ggcgtcgacggtcgtcgctatcgcgcgcgctgggaggccaaccgggcacgggacaaaccg
gcgggcaagttgcagaacagccggcagtcgctgcgcgatctggacaatgaccagctgctc
gccagccagaaaggtgaatacaaacaactgctggaagcccgcctggggctgaacttcgag
caattcacccgtgcggtgatgctggcgcagagcgagttcagtgcctttctcaaagccgac
gacaacgaacgcagcgaactgctggaaaagctcacagacaccgcgctctatacgcgcctg
ggcaaacgcgccttcgaaaagagccgcgacgcccgcgagcagctcaagcactggcaggac
caggccaccggtatcgcgccactggccgccgaagcgcgcgaagcgctggatctggagttt
cacaccgccagcgagcaactgcggcagcaccaggcgcacctcaagcaagtggaacagcaa
caacagtggcactgcgaagaccggcgcctgagcgacgactgccaggcggcacggcagcag
gtgcaagacgcatcccaggcatgggaagcaggcgccgagcagcgtctgcagttacacatg
ctcgagcaactggcaccgcaacggcacctgttcagccgccagcatgagttgcagactcag
ctccagcccctggccgagcgcatcgagcaggcgcgcgcgcaacaggtgcaacaacaggtg
cagcgcgagcagttggacgtgcaacgcgaacagaccgggcaccagttgcaacaagcgctg
gcgcaacaggccgaggcccagccgctcctgcagcaggccttcgacgcgcagtcgaatcgt
ggtcgtttgcacaccgagatcgaaccactgcgtccggcactggccgaggccgaacgccag
ctgtccgcagggcagcaggcgctgcacgtcatggagcaacagcaggccggcagtggcgaa
cgcctgcagcaggtcgccgaagcgcttgagcgcagcgccgagctggcccccctggctggc
acgtggggggcgtacttgccgcgtctgcaacaggtggtgacactgagcagtcgcctgcgc
cagggccaggccgaactgcctgccttgcagacgcaggcgcacaccacacgcacgagcctt
gcagagcatgaaagcgaccttgcccgggtatttcagaatgcgccgtgcagcgccgagcaa
ctgcccgagcgcgtgcagcaactgactcaacggctgcaacagcaacaccaggaactgcgc
gccgtgcaggaactggaacggctgtggcagcggcgcagcgcaattgaggaacgtcttgaa
caggggcgtcagcaacaggccagcctgctggcccggcgtgaacaactgactgctcaggga
ctggaggtccgcgcagcccacgaacaggccgagcaagccttgaaggtgaccctgcaactg
ctcgaacgccagcgcctggcgcgcagtgaaagcgtcgaacagttgcgcgaacgcttgcag
cccgagcagccctgtccggtctgtggcagtgtggagcacccctatcatgctccggaggcg
ctgttgcaggcgctgtcggcacacgatgacgacgaagagcaacgcgcccgcgctgcgttg
aagccggtgtccgaacgcctggtcgagctgcgtaccgaagtcggcgcgctgatcgagcag
cacaagcagctcaaggcgcaggagcaacaatggctcgaccagccgggtgacgctgagctg
gcccggcatccgctctaccctgccctgtgcgacgccgagcagccggcggactggctgtgc
gacaccctggctggccacacgcgttcgatcgacgaggatgaacgtcagcagaacagcctg
ctggccttgcaacagcaggcgagcgccttgcaacgcgccgtggcccaggccagggaagcc
agccagcaggcgcagcagcttctacaagcgcatcaggcccacctggacgccgaccagcag
cggctcgacgaagagttgcaggcgctggccagtcagttgcccgccgctcgcctgcaggcc
ctgcgcgaacaccccgcgcagacgttcatggcgctggaacaaagcatcggcgagcgcctg
gcgcaaatcgaacagcgcgatgaagaacagggcgagttcgacgcccgcgcgcgccgcatc
gagcaggcccgcagcgagcatgcgcggcaccagaccgattgcgagcagcaacgccagcgg
gtccaggcgctgtccgcgcaactgcagacctgtgaggcacggctgcgcgaattgctgggc
gagcatgcccaggcgtccgcctggcagacggccttgcacgatcaggttgagatggcgcgc
gaccaggaacggcaaaccgaccgccagcaacaggatctacgaacccggacagtgcagacc
gccagcgccctggaggccgacactgcgcagcaggcccaattgcagcaaaccctggctgac
gtggagcaggccctgcacgcttggcgcgagcagcgtccgcaactggaagacgacgggttg
caggcactgctcgccatcgatgaaccccaggtcgatgagctgcgcagccgcctgcagagc
acggaaaaagccctggaacaggcacgcatccgcttgcacgaacgcgagcagcgccagcag
tctcatcggacacaggtcgacgcgattgccagtgtcgaggcactggacgcacagcacgcc
gccctgctgatggacgtcgaacggcaggagcaccactgcgccgagctgcgcgcccggcaa
gccgaagaccagcgccggcacagcgccaaccatgccctgcagacgcagattgccgaggct
gacgcgcactaccagcgctgggcccgattggcggcactgatcggctcggccgaaggcgat
cgcttccgcaaaatcgcccaggcctacaacctcgacctgctggtgcaccacgccaacgtg
cagttgcgccagttggtgcgccgctaccgtctcaagcgcggcggcagcatgctcgggttg
ttggtgctggacaccgaaatgggcgacgaactgcgttcggtgcattcactgtcgggcggg
gagaccttcctggtgtcgctggcgctggccttggggctggcgtcgatggcgtcgagcacg
ctgcgcatcgagtcgctgttcatcgacgaaggcttcggcagcctcgatcccgaatcgctg
caactggccatggacgcactcgacggcttgcaggcacaagggcgcaaggtggcggtgatt
tcccacgtgcaggagatgcacgagcgtattccggtgcagattcaggtgcggcgtctgggc
aatgggctgagcagcgtcgaggtcagcggctag
DBGET
integrated database retrieval system
