Pseudomonas rhizosphaerae: LT40_01765
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Entry
LT40_01765 CDS
T03339
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
prh
Pseudomonas rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prh03400
]
LT40_01765
DNA repair and recombination proteins [BR:
prh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LT40_01765
Archaeal homologous recombinant proteins
LT40_01765
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AIS16191
UniProt:
A0A089ZPN5
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All DBs
Position
complement(375249..376490)
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AA seq
413 aa
AA seq
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MRLFHTSDWHLGQSLHGQERDFEHASFLRWLLRQLAQRQPDVLLVAGDIFDTVNPPVRAQ
ERLYNFIVSAHEQQPQLTIVMIAGNHDSGSRIELPGPLMRRLRTHALGRVMWLEDGRLDS
ERLLLPLPDASGEVQAWCLALPFLRPAEVTGATLGEDYLQGIARVHEMLIAAANARRSPG
QALIAISHAHMAGGSVSMESERSLVIGSAEALPASLFDASISYVALGHLHKPQKVNGESR
IRYSGSPIPLSFSEIEYPHQILEIECAGEQLVSVEPILIPRAVDLLRIGPAPLPQVREQL
QQLPDVDLLADVLGYPWLEVRVVLDEPQPDLRQHIETALQGKAVRLVRIAAEYAGRVNAD
NEDVGALIELDQLSPHELFSRAWLDSYGSEVDEQTLDDFAQLLQEVQLEGETP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgttccacacctccgactggcacctcggccaaagcctgcacggtcaggagcgc
gacttcgagcacgcaagcttcctgcgctggctgctgcgtcagctcgcccagcgccagccc
gacgtgctgctggtggcaggcgacatcttcgacacggtcaatccgccggtgcgggcgcag
gagcggctgtacaacttcatcgtcagcgcccacgagcaacaaccgcagctgaccattgtg
atgatcgccggcaaccacgactccggttcgcgaatcgaactgcccgggccgttgatgcgc
cgcttgcgcacccacgcgctgggccgggtgatgtggctcgaagacggccgcctcgacagc
gagcggttgttgctcccgctgcccgatgccagtggtgaggtgcaggcctggtgcctggcc
ctgcctttcctgcgccctgccgaggtgaccggcgcaaccctgggcgaggattacctgcaa
ggcatcgcccgggtgcacgagatgctgatcgccgctgccaatgcccgacgctcgccgggt
caggccctgatcgccatcagccacgcgcacatggcggggggttcggtgtcgatggagtcc
gagcgcagcctggtgatcggcagcgccgaggcgctgccggccagcctgttcgacgccagc
atcagctacgttgcgctgggccatctgcacaagccacagaaggtcaacggcgaatcgcgc
attcgctacagcggctcgcccatacccctgtcgttttccgaaatcgaatacccgcaccag
atcctcgagatcgagtgcgccggcgagcagctggtgagcgtggaaccgatcctgatcccg
cgcgcggtcgacctgctgcgcatcggcccggcgccgttgccgcaggtccgcgaacagttg
cagcaactaccggacgtggacctgttggccgatgtgctgggctacccctggctggaagtg
cgggtggtactcgacgagccgcaaccggacctgcgccagcacatcgaaaccgcgctgcaa
ggcaaggccgtgcgtctggtgcggatcgctgccgagtacgccgggcgggtcaacgccgac
aacgaggatgtcggcgccctgattgagctggaccagctcagcccccacgaactgttcagc
cgcgcctggctcgacagctatggcagcgaggtggacgaacagaccctggatgacttcgcg
cagttgttgcaggaagtgcagctggagggcgaaaccccatga
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