Pseudomonas rhizosphaerae: LT40_02025
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Entry
LT40_02025 CDS
T03339
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LT40_02025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prh02000
]
LT40_02025
Transporters [BR:
prh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LT40_02025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
DUF1846
Motif
Other DBs
NCBI-ProteinID:
AIS16240
UniProt:
A0A089YRA0
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All DBs
Position
complement(432561..433601)
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AA seq
346 aa
AA seq
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MKPVKRTVHALSLAALLAATGAQAGPTLYLGMNGGTMERLYADKVLPAFEQANDVKVVIV
PGTSSDILAKVQASKDNPQIHVMFLDDGIMYRAISMGLCDTLQDSDGLAAIPAKARIKDQ
AAAVSLGVTGLAYNTRLFKKNGWAAPTSWMDMADSRFKEKLVFQSLASSTFGLHGFLMFN
RLQGGSETDVEPGFKAWPKTVGPNVLEYIASSAKISEMVQTDEAALFPLTPTQVTALKLR
GVPVEYAQPKEGAVVLNVAECVIAKNDQPELAQKLAAYLLSPKAQSPALEEGDQIPSNPN
TPTTDKTRGQVQAMEKYLETAVAIDWDQVNQLRPAWNARWSRSIER
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagtcaaacgcacggttcacgcactctccctcgctgccctgctggccgccacc
ggcgctcaggccggtcccacgctgtacctgggtatgaacggcggcaccatggaacgcttg
tacgccgacaaggtgctgccggcgttcgaacaggccaacgatgtgaaggtggtcatcgtg
ccaggcacctcttcggacattctcgccaaggttcaggcgagcaaggacaacccacagatc
catgtgatgttcctcgatgacggcatcatgtaccgagccatttccatgggcctgtgcgac
accttgcaggacagcgacggcctggctgcaataccggccaaggcgcggatcaaggaccag
gcggccgcggtcagcctgggcgtgaccgggcttgcctacaacacgcgcttgttcaagaaa
aatggctgggctgcgccgacttcgtggatggacatggccgatagccgcttcaaggaaaaa
ctggtattccagtctttggcgtcctcgaccttcgggctgcacggcttcctgatgttcaac
cgcttgcagggtggtagcgaaaccgacgtcgagccggggttcaaggcgtggccgaagacg
gtgggccccaatgtgctggagtacattgccagttcggcgaagatttccgagatggtccag
accgacgaagcggcgctgttcccactgacgcctacccaggtgaccgctttgaaactgcgc
ggtgtgccggttgaatacgcgcagcccaaggaaggcgcggtggtgctcaacgtggccgag
tgcgtgatcgccaagaacgatcagcccgagcttgcgcagaagctggcggcctacctgctg
agccccaaggcgcagtcaccggcactggaggaaggcgaccagataccgtccaaccccaac
acgccgaccaccgacaagacccgtggccaggtgcaggcaatggaaaagtacctggagacg
gcagtggccatcgactgggaccaggtcaaccagctccgccccgcctggaacgcccgctgg
agccgttcgatcgagcgctag
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